RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 CT83Q5H943 113 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 ARL6IP6Q8N6S5 226 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 HIST1H2BLQ99880 126 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 RPP21Q9H633 154 aaKnown RBP19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 ZFP30Q9Y2G7 519 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 SPG11Q96JI7 2443 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 C19orf71A6NCJ1 209 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 H3BUA1 57 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 ZNF253O75346 499 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 P01737 135 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 TRGV3P03979 118 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 LOXL1Q08397 574 aaPredicted RBP19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 RASL11AQ6T310 242 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 PRSS22Q9GZN4 317 aa19.98■□□□□ 0.79
SHARPIN-202ENST00000398712 BRI3O95415 125 aa19.97■□□□□ 0.79
SHARPIN-202ENST00000398712 SLC35B1P78383 322 aa19.97■□□□□ 0.79
SHARPIN-202ENST00000398712 PSG3Q16557 428 aa19.97■□□□□ 0.79
SHARPIN-202ENST00000398712 LINC00527Q9UJ94 153 aa19.97■□□□□ 0.79
SHARPIN-202ENST00000398712 MRPL54Q6P161 138 aaKnown RBP19.96■□□□□ 0.79
SHARPIN-202ENST00000398712 ZNF331Q9NQX6 463 aaPredicted RBP19.96■□□□□ 0.79
SHARPIN-202ENST00000398712 HLA-DQA1P01909 254 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 FRMD6-AS1P0C7T7 363 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 TMEM136Q6ZRR5 245 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 PACRGQ96M98 296 aaPredicted RBP19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 PSG8Q9UQ74 426 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 PCP4L1A6NKN8 68 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 A8MWL6 223 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 LINC00322Q6ZN03 302 aaPredicted RBP19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 LRRC75A-AS1Q8N1F1 130 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 NUP35Q8NFH5 326 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 WIPF2Q8TF74 440 aaPredicted RBP19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 NIT2Q9NQR4 276 aa19.95■□□□□ 0.78
SHARPIN-202ENST00000398712 IGHV3OR16-8A0A075B7F1 116 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 M0R3E3 92 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 TGFAP01135 160 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 CIARTQ8N365 385 aaPredicted RBP19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 GBGT1Q8N5D6 347 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 OR4B1Q8NGF8 309 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 NEU1Q99519 415 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 SMAD5-AS1Q9Y6J3 95 aa19.94■□□□□ 0.78
SHARPIN-202ENST00000398712 RAB4BP61018 213 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 DEFB113Q30KQ7 82 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.93■□□□□ 0.784e-10■■■■□ 26.2
SHARPIN-202ENST00000398712 HIGD1CA8MV81 97 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 BUB3O43684 328 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 AMBPP02760 352 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 PPIFP30405 207 aaKnown RBP19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 TPPP2P59282 170 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 KRTAP10-9P60411 292 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 C1orf194Q5T5A4 169 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 METTL26Q96S19 204 aa19.93■□□□□ 0.78
SHARPIN-202ENST00000398712 A0A087X0K7 114 aa19.92■□□□□ 0.78
SHARPIN-202ENST00000398712 CRISP2P16562 243 aa19.92■□□□□ 0.78
SHARPIN-202ENST00000398712 COL8A1P27658 744 aa19.92■□□□□ 0.78
SHARPIN-202ENST00000398712 USMG5Q96IX5 58 aa19.92■□□□□ 0.78
SHARPIN-202ENST00000398712 GFRA4Q9GZZ7 299 aa19.92■□□□□ 0.78
SHARPIN-202ENST00000398712 CLPSL1A2RUU4 121 aa19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 FBLL1A6NHQ2 334 aaKnown RBP19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 RNF223E7ERA6 249 aa19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 NPIPB6E9PJ23 425 aa19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 PYY3Q5JQD4 70 aa19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 ATP5L2Q7Z4Y8 100 aa19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 TMEM18Q96B42 140 aa19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 UTP20O75691 2785 aaKnown RBP19.91■□□□□ 0.78
SHARPIN-202ENST00000398712 BLCAPP62952 87 aa19.9■□□□□ 0.78
SHARPIN-202ENST00000398712 FAM231BA6NCW3 169 aa19.9■□□□□ 0.78
SHARPIN-202ENST00000398712 ZNF785A8K8V0 405 aa19.9■□□□□ 0.78
SHARPIN-202ENST00000398712 DEFB112Q30KQ8 113 aa19.9■□□□□ 0.78
SHARPIN-202ENST00000398712 NOL4LQ96MY1 436 aaPredicted RBP19.9■□□□□ 0.78
SHARPIN-202ENST00000398712 ARL3P36405 182 aa19.89■□□□□ 0.77
SHARPIN-202ENST00000398712 S100A12P80511 92 aa19.89■□□□□ 0.77
SHARPIN-202ENST00000398712 MAPK1IP1LQ8NDC0 245 aa19.89■□□□□ 0.77
SHARPIN-202ENST00000398712 ZC2HC1AQ96GY0 325 aa19.89■□□□□ 0.77
SHARPIN-202ENST00000398712 USP9YO00507 2555 aaPredicted RBP19.89■□□□□ 0.77
SHARPIN-202ENST00000398712 GRIFINA4D1Z8 144 aa19.88■□□□□ 0.77
SHARPIN-202ENST00000398712 ZNF580Q9UK33 172 aa19.88■□□□□ 0.77
SHARPIN-202ENST00000398712 IGHV4-31P0DP07 118 aa19.88■□□□□ 0.77
SHARPIN-202ENST00000398712 Q0VG73 95 aa19.88■□□□□ 0.77
SHARPIN-202ENST00000398712 Q5PR19 223 aa19.88■□□□□ 0.77
SHARPIN-202ENST00000398712 APCSP02743 223 aa19.87■□□□□ 0.77
SHARPIN-202ENST00000398712 C16orf54Q6UWD8 224 aa19.87■□□□□ 0.77
SHARPIN-202ENST00000398712 TCF24Q7RTU0 167 aa19.87■□□□□ 0.77
SHARPIN-202ENST00000398712 SLC50A1Q9BRV3 221 aa19.87■□□□□ 0.77
SHARPIN-202ENST00000398712 ANKRD17O75179 2603 aaKnown RBP19.87■□□□□ 0.77
SHARPIN-202ENST00000398712 CSMD1Q96PZ7 3565 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 DOPEY2Q9Y3R5 2298 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 CRYBG3Q68DQ2 2970 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 CHEK1O14757 476 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 CT45A10P0DMU9 189 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 TMEM256Q8N2U0 113 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 U3KQE9 123 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 VPS13CQ709C8 3753 aa19.86■□□□□ 0.77
SHARPIN-202ENST00000398712 IGHV4-59P01825 116 aa19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 PF4V1P10720 104 aa19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 DNLZQ5SXM8 178 aa19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 RBPMS2Q6ZRY4 209 aaKnown RBP19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 OR2D3Q8NGH3 330 aa19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 SAPCD1Q5SSQ6 148 aa19.85■□□□□ 0.77
SHARPIN-202ENST00000398712 OR5R1Q8NH85 324 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms