RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 RIF1Q5UIP0 2472 aaKnown RBP5.69□□□□□ -1.5
RGPD1-201ENST00000398193 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
RGPD1-201ENST00000398193 C9orf152Q5JTZ5 239 aa5.69□□□□□ -1.5
RGPD1-201ENST00000398193 EXOC3-AS1Q8N2X6 119 aa5.69□□□□□ -1.5
RGPD1-201ENST00000398193 NUP35Q8NFH5 326 aa5.69□□□□□ -1.5
RGPD1-201ENST00000398193 PEF1Q9UBV8 284 aaKnown RBP5.69□□□□□ -1.5
RGPD1-201ENST00000398193 LINC01548A6NM66 108 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 IGHV3-23P01764 117 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 APCSP02743 223 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 HBBP68871 147 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 RIGQ13278 110 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 LY6EQ16553 131 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 FAM106AQ4KMX7 169 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 OR4X2Q8NGF9 303 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 PLCE1Q9P212 2302 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 CD5LO43866 347 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 BORCS7Q96B45 105 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 AURKAIP1Q9NWT8 199 aaPredicted RBP5.68□□□□□ -1.5
RGPD1-201ENST00000398193 A8MWP6 167 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 ZNF702PQ9H963 129 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 IGHV7-4-1A0A0J9YVY3 117 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 A1L4Q6 167 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 HIST1H1AQ02539 215 aaPredicted RBP5.68□□□□□ -1.5
RGPD1-201ENST00000398193 ASCL2Q99929 193 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 SVILO95425 2214 aa5.68□□□□□ -1.5
RGPD1-201ENST00000398193 TRAV2A0A0B4J234 112 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 RAB4AP20338 218 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 LCN12Q6JVE5 192 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 C17orf77Q96MU5 243 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 NHLRC2Q8NBF2 726 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 NRGNQ92686 78 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 LINC00479Q96M42 142 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 ODF3Q96PU9 254 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 NEU1Q99519 415 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 ACACAQ13085 2346 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 SOCS3O14543 225 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 LGALS1P09382 135 aaKnown RBP5.67□□□□□ -1.5
RGPD1-201ENST00000398193 COL8A1P27658 744 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 ID1P41134 155 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 ZC2HC1AQ96GY0 325 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 LINC00477Q96M19 166 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 MS4A10Q96PG2 267 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 PRR25Q96S07 402 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 DAZ1Q9NQZ3 744 aaKnown RBP5.67□□□□□ -1.5
RGPD1-201ENST00000398193 RPH3ALQ9UNE2 315 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 LINC01559Q495D7 138 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 ZNF493Q6ZR52 646 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 UBE2E2Q96LR5 201 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 C12orf57Q99622 126 aa5.67□□□□□ -1.5
RGPD1-201ENST00000398193 IGHV4-59P01825 116 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 AKR1D1P51857 326 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 TRAV8-2A0A0B4J237 113 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 S4R3C0 116 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 MALRD1Q5VYJ5 2156 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 TMEM189A5PLL7 270 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 MED14OSP0DP75 135 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 CRISP2P16562 243 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 C8orf86Q6ZUL3 223 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 PF4V1P10720 104 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 KRTAP10-9P60411 292 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 HIST1H2BLQ99880 126 aa5.66□□□□□ -1.5
RGPD1-201ENST00000398193 SH2D7A6NKC9 451 aaPredicted RBP5.65□□□□□ -1.5
RGPD1-201ENST00000398193 SH2D1AO60880 128 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 APOHP02749 345 aaPredicted RBP5.65□□□□□ -1.5
RGPD1-201ENST00000398193 CTRLP40313 264 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 KCNS1Q96KK3 526 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 C16orf95Q9H693 158 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 SMPXQ9UHP9 88 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 F2Z2F3 143 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 ZNF138P52744 262 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 APRG1Q8IVJ8 170 aa5.65□□□□□ -1.5
RGPD1-201ENST00000398193 PTPRZ1P23471 2315 aaPredicted RBP5.65□□□□□ -1.51
RGPD1-201ENST00000398193 PMCHP20382 165 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 CBLN1P23435 193 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 BCL6BQ8N143 479 aaPredicted RBP5.65□□□□□ -1.51
RGPD1-201ENST00000398193 C4orf3Q8WVX3 66 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 CHCHD1Q96BP2 118 aaKnown RBP5.65□□□□□ -1.51
RGPD1-201ENST00000398193 FAM19A4Q96LR4 140 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 CNFNQ9BYD5 112 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 LOC400499M0QZD8 3231 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 BLCAPP62952 87 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 CACNG7P62955 275 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 PRR27Q6MZM9 219 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 OR2D3Q8NGH3 330 aa5.65□□□□□ -1.51
RGPD1-201ENST00000398193 A0A1B0GUT8 65 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 FABP5P3A8MUU1 101 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 U3KQK5 164 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 ANKHD1Q8IWZ3 2542 aaKnown RBP5.64□□□□□ -1.51
RGPD1-201ENST00000398193 TMEM78Q5T7P6 136 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 GTSF1Q8WW33 167 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 H3BTX0 84 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 AMBPP02760 352 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 JOSD1Q15040 202 aaPredicted RBP5.64□□□□□ -1.51
RGPD1-201ENST00000398193 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
RGPD1-201ENST00000398193 NOL4LQ96MY1 436 aaPredicted RBP5.64□□□□□ -1.51
RGPD1-201ENST00000398193 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms