RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IGHV3-72A0A0B4J1Y9 119 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 A6NJY4 79 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 K7EQM0 130 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 KLK10O43240 276 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 IGLV2-23P01705 113 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 ZNF137PP52743 207 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 RBPMS2Q6ZRY4 209 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 GTSF1Q8WW33 167 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 ABCA1O95477 2261 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 PKDREJQ9NTG1 2253 aa12.74□□□□□ -0.37
CHMP1A-201ENST00000397901 INS-IGF2F8WCM5 200 aa12.73□□□□□ -0.37
CHMP1A-201ENST00000397901 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
CHMP1A-201ENST00000397901 SPANXB1Q9NS25 103 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-201ENST00000397901 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-201ENST00000397901 CSN3P07498 182 aa12.73□□□□□ -0.37
CHMP1A-201ENST00000397901 GPR82Q96P67 336 aa12.73□□□□□ -0.37
CHMP1A-201ENST00000397901 MUC6Q6W4X9 2439 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 F8W1H4 67 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 C3orf36Q3SXR2 165 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 P01737 135 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 APOHP02749 345 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 FCGR2BP31994 310 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 LYPD2Q6UXB3 125 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 GEMIN7Q9H840 131 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
CHMP1A-201ENST00000397901 TNFRSF1AP19438 455 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 LGALS9BQ3B8N2 356 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 LGALS9CQ6DKI2 356 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 ANKRD11Q6UB99 2663 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 VMA21Q3ZAQ7 101 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 TMEM116Q8NCL8 245 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 CCL17Q92583 94 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 ZNF492Q9P255 531 aa12.71□□□□□ -0.37
CHMP1A-201ENST00000397901 MLST8Q9BVC4 326 aa12.7□□□□□ -0.38
CHMP1A-201ENST00000397901 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
CHMP1A-201ENST00000397901 ATMQ13315 3056 aa12.7□□□□□ -0.38
CHMP1A-201ENST00000397901 C17orf100A8MU93 164 aa12.7□□□□□ -0.38
CHMP1A-201ENST00000397901 HAX1O00165 279 aa12.7□□□□□ -0.38
CHMP1A-201ENST00000397901 PRB3Q04118 309 aaPredicted RBP12.7□□□□□ -0.38
CHMP1A-201ENST00000397901 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 C19orf71A6NCJ1 209 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 MRGPRG-AS1Q2M3A8 158 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 FAM57AQ8TBR7 257 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 Q9H3A6 140 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 PRB4P10163 310 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 DLX1P56177 255 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 ADIPOQQ15848 244 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 Q71RC1 249 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 OR8A1Q8NGG7 326 aa12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 DAZAP1Q96EP5 407 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 SPAG8Q99932 426 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-201ENST00000397901 NDUFB3O43676 98 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 TCRAP04437 139 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 GP9P14770 177 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 CNTFRP26992 372 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 LTAP01374 205 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 WFDC2Q14508 124 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 FMC1Q96HJ9 113 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
CHMP1A-201ENST00000397901 TMEM178BH3BS89 294 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 NUP37Q8NFH4 326 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 TRGV9Q99603 122 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 CTSZQ9UBR2 303 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 ADGRG4Q8IZF6 3080 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 PCNX1Q96RV3 2341 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 A0A1W2PRD5 423 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 A0A1W2PRF3 423 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 A0A1W2PRM7 423 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 CRYGCP07315 174 aa12.67□□□□□ -0.38
CHMP1A-201ENST00000397901 KALRNO60229 2985 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 SERTM2A0A1B0GWG4 89 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 GCSHP23434 173 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 NMUP48645 174 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 LYZP61626 148 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 PCP2Q8IVA1 136 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 ASCL2Q99929 193 aa12.66□□□□□ -0.38
CHMP1A-201ENST00000397901 COL8A1P27658 744 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 CACNG7P62955 275 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 BSPH1Q075Z2 132 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 PRNTQ86SH4 94 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 LINC00311Q8N616 119 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 F11RQ9Y624 299 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 FXYD2P54710 66 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 TCTAP57738 103 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 TM4SF20Q53R12 229 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms