RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FAM231DQ6ZW35 169 aa15.04■□□□□ -0
PDLIM2-204ENST00000397760 S4R3C0 116 aa15.04■□□□□ -0
PDLIM2-204ENST00000397760 FAM181BA6NEQ2 426 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 OR8I2Q8N0Y5 310 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 OR5AU1Q8NGC0 362 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 SMIM12Q96EX1 92 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 PAXXQ9BUH6 204 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 NAGKQ9UJ70 344 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 IGKV1D-37A0A075B6S9 117 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 SNURFLB1AK76 121 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 OR10J3Q5JRS4 329 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 IBA57Q5T440 356 aaKnown RBP15.03■□□□□ -0
PDLIM2-204ENST00000397760 C2orf88Q9BSF0 95 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 CHRDL1Q9BU40 450 aa15.03■□□□□ -0
PDLIM2-204ENST00000397760 HLA-DQA1P01909 254 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 MFAP4P55083 255 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 HILS1P60008 231 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 C15orf32Q32M92 178 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 C1orf194Q5T5A4 169 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 Q8N2B8 174 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 TRGV9Q99603 122 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 TP53TG3Q9ULZ0 132 aa15.02■□□□□ -0
PDLIM2-204ENST00000397760 HIVEP1P15822 2718 aa15.02□□□□□ -0.01
PDLIM2-204ENST00000397760 H3BUA1 57 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 CFHR3Q02985 330 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 VN1R17PQ8TDU5 208 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 TMEM190Q8WZ59 177 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 C21orf62Q9NYP8 219 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 KIR2DL5BA0A0G2JN68 375 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 KIR2DL5BA0A0G2JPC4 375 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 NUPR1O60356 82 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 BRI3O95415 125 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 SCGB1D1O95968 90 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 IGHV3-23P01764 117 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 TRGV3P03979 118 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 RNASE1P07998 156 aaKnown RBP15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 PATE2Q6UY27 113 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 KIR2DL5AQ8N109 375 aa15.01□□□□□ -0.01
PDLIM2-204ENST00000397760 GRIFINA4D1Z8 144 aa15□□□□□ -0.01
PDLIM2-204ENST00000397760 IZUMO1RA6ND01 250 aa15□□□□□ -0.01
PDLIM2-204ENST00000397760 Q56UQ5 140 aa15□□□□□ -0.01
PDLIM2-204ENST00000397760 TMEM136Q6ZRR5 245 aa15□□□□□ -0.01
PDLIM2-204ENST00000397760 ZNF329Q86UD4 541 aa15□□□□□ -0.01
PDLIM2-204ENST00000397760 WIPF2Q8TF74 440 aaPredicted RBP15□□□□□ -0.01
PDLIM2-204ENST00000397760 RNASE7Q9H1E1 156 aaKnown RBP15□□□□□ -0.01
PDLIM2-204ENST00000397760 FAM223BA6NKX1 122 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 PEX7O00628 323 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 SERF1AO75920 110 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 IGLV1-40P01703 118 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 IGLC1P0CG04 106 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 PF4V1P10720 104 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 MYCNOSP40205 109 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 LINC00310P59036 64 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 SSTP61278 116 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 ATP5G2Q06055 141 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 MORN5Q5VZ52 161 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 BAGE3Q86Y29 109 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 BAGE2Q86Y30 109 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 FAM223AQ8IWN6 122 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 FXYD5Q96DB9 178 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 NAT8BQ9UHF3 227 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 TRAV5A0A0B4J249 113 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 GNG7O60262 68 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 PLP1P60201 277 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 JMJD8Q96S16 334 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 TXN2Q99757 166 aa14.99□□□□□ -0.01
PDLIM2-204ENST00000397760 F8W735 103 aaPredicted RBP14.98□□□□□ -0.01
PDLIM2-204ENST00000397760 Q6ZSV7 163 aa14.98□□□□□ -0.01
PDLIM2-204ENST00000397760 MRPL52Q86TS9 123 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-204ENST00000397760 ZNF502Q8TBZ5 544 aa14.98□□□□□ -0.01
PDLIM2-204ENST00000397760 EEF1AKMT3Q96AZ1 226 aa14.98□□□□□ -0.01
PDLIM2-204ENST00000397760 KLK15Q9H2R5 256 aa14.98□□□□□ -0.01
PDLIM2-204ENST00000397760 TRAV30A0A087WSZ9 112 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 A0A1B0GUS0 222 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 CRLF1O75462 422 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 IGKV1-17P01599 117 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 IGHG4P01861 327 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 MGST1P10620 155 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 SLC35B1P78383 322 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 SERTAD4Q9NUC0 356 aa14.97□□□□□ -0.01
PDLIM2-204ENST00000397760 OR2T8A6NH00 312 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 FCGR2BP31994 310 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 MTORP42345 2549 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 RAB9AP51151 201 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 TMEM183BQ1AE95 376 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 C10orf99Q6UWK7 81 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 ZNF600Q6ZNG1 722 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 LINC00305Q7Z4B0 112 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 GRAMD2BQ96HH9 432 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 USMG5Q96IX5 58 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 KLF12Q9Y4X4 402 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 SETXQ7Z333 2677 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 TRBV7-1A0A0A6YYK4 115 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 TEX43Q6ZNM6 134 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 LCNL1Q6ZST4 164 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 Q6ZWC4 215 aa14.96□□□□□ -0.01
PDLIM2-204ENST00000397760 PYYP10082 97 aa14.95□□□□□ -0.02
PDLIM2-204ENST00000397760 PSMB8P28062 276 aa14.95□□□□□ -0.02
PDLIM2-204ENST00000397760 CCDC140Q96MF4 163 aa14.95□□□□□ -0.02
PDLIM2-204ENST00000397760 GNB4Q9HAV0 340 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms