RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 JMJD8Q96S16 334 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ASCL2Q99929 193 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 TRAV8-1A0A0A6YYK1 113 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 FAM53AQ6NSI3 398 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-205ENST00000397611 CIARTQ8N365 385 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-205ENST00000397611 SLC25A2Q9BXI2 301 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 V9GYV3 84 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 NAV3Q8IVL0 2385 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 TRAV3A0A0B4J244 114 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 MYOD1P15172 320 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV3-23P01764 117 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 LINC01559Q495D7 138 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 CD300EQ496F6 205 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 OTORQ9NRC9 128 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 DOCK11Q5JSL3 2073 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 IGKV1D-17A0A075B6S4 117 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 PATE3B3GLJ2 98 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 SAA2P0DJI9 122 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 SSBP2P81877 361 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 KLF17Q5JT82 389 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 USP9YO00507 2555 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 PSMB11A5LHX3 300 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 GFRALQ6UXV0 394 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 SPATA12Q7Z6I5 190 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 GFRA4Q9GZZ7 299 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV1-24A0A0C4DH33 117 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 A0A1W2PPM0 123 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 SAA1P0DJI8 122 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-205ENST00000397611 SYT8Q8NBV8 401 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 SPG11Q96JI7 2443 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 LINC00205P59089 165 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 CCL8P80075 99 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 KHDC1LQ5JSQ8 128 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 HES7Q9BYE0 225 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 ATRXP46100 2492 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 ADAMTS20P59510 1910 aa4.42□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV3-35A0A0C4DH35 117 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 PPIFP30405 207 aaKnown RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 FAM201AQ5SY85 155 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV3-74A0A0B4J1X5 117 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 M0R381 172 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 IFI27P40305 119 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 FAM74A4Q5TZK3 123 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 CD177Q8N6Q3 437 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF292O60281 2723 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 RNASE1P07998 156 aaKnown RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 DLX4Q92988 240 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 TRAV2A0A0B4J234 112 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV3-66A0A0C4DH42 116 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 RNASE2P10153 161 aaKnown RBP4.41□□□□□ -1.7
PTPRD-205ENST00000397611 THAP8Q8NA92 274 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 PHLDA3Q9Y5J5 127 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 CEACAM3P40198 252 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 RNFT1Q5M7Z0 435 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 LYPD1Q8N2G4 141 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 RPRMLQ8N4K4 120 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV3OR16-8A0A075B7F1 116 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 SMKR1H3BMG3 65 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 MYCNOSP40205 109 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 CTRLP40313 264 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 IGF2RP11717 2491 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 K7EN84 100 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 LINC00310P59036 64 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 RBX1P62877 108 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 LYZL1Q6UWQ5 148 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 Q6ZS92 163 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 DEFB125Q8N687 156 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 NUP37Q8NFH4 326 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 PSG8Q9UQ74 426 aa4.41□□□□□ -1.7
PTPRD-205ENST00000397611 COX8AP10176 69 aa4.4□□□□□ -1.7
PTPRD-205ENST00000397611 NDUFA4L2Q9NRX3 87 aa4.4□□□□□ -1.7
PTPRD-205ENST00000397611 SPRR3Q9UBC9 169 aa4.4□□□□□ -1.7
PTPRD-205ENST00000397611 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.7
PTPRD-205ENST00000397611 C16orf92Q96LL3 132 aa4.4□□□□□ -1.7
PTPRD-205ENST00000397611 MED13LQ71F56 2210 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 TCRBV4S1A1TA0A5B7 111 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 TCRAP04437 139 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 ANXA2RQ3ZCQ2 193 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 AMTNQ6UX39 209 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 C1orf159Q96HA4 380 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 MLST8Q9BVC4 326 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 B5MCH6 92 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 EBLN2Q6P2I7 272 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 ASCL5Q7RTU5 278 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 FAM167A-AS1Q96KT0 104 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 TRGV9Q99603 122 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 PRSS22Q9GZN4 317 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 FAM216BQ8N7L0 139 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 DEFB104AQ8WTQ1 72 aa4.4□□□□□ -1.71
PTPRD-205ENST00000397611 SMIM27A0A1W2PRY6 76 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 TMEM8BA6NDV4 472 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms