RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PPP1R14DQ9NXH3 145 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 G3V318 75 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 SCGB2A1O75556 95 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 MAJINQ3KP22 176 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 ABCA12Q86UK0 2595 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 TNFRSF13BO14836 293 aaPredicted RBP8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 C3orf79P0CE67 100 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 FAM106CPP0CH98 169 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 PDLIM4P50479 330 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 PSG8Q9UQ74 426 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 RNF114Q9Y508 228 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 SORL1Q92673 2214 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 PSMB11A5LHX3 300 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 K7EIM0 57 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 NPSP0C0P6 89 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 PRTN3P24158 256 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 NDPQ00604 133 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 C18orf32Q8TCD1 76 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 FMC1Q96HJ9 113 aa8.26□□□□□ -1.09
CPSF1P1-201ENST00000397477 TRAV9-1A0A075B6T8 112 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 NPIPB5A8MRT5 1133 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 CLEC3BP05452 202 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 COX19Q49B96 90 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 NIT1Q86X76 327 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 NEU4Q8WWR8 484 aaPredicted RBP8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 C8orf49Q96NF6 230 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 OTORQ9NRC9 128 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 NAV2Q8IVL1 2488 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 I3L2K1 104 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 GP9P14770 177 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 SAA4P35542 130 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 HINT1P49773 126 aaPredicted RBP8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 C15orf32Q32M92 178 aa8.25□□□□□ -1.09
CPSF1P1-201ENST00000397477 SNAI2O43623 268 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 RHOGP84095 191 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 C1RLQ9NZP8 487 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 TMEM189A5PLL7 270 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 ARMS2P0C7Q2 107 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 LINC00310P59036 64 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 C1orf194Q5T5A4 169 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 RBPMS2Q6ZRY4 209 aaKnown RBP8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 ERASQ7Z444 233 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 S100A7AQ86SG5 101 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 Q86TA4 180 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 OR8A1Q8NGG7 326 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 A0A1W2PPR1 153 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 MRGPRG-AS1Q2M3A8 158 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 HIF1ANQ9NWT6 349 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 RABAC1Q9UI14 185 aa8.24□□□□□ -1.09
CPSF1P1-201ENST00000397477 DCHS2Q6V1P9 2916 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 HSBP1L1C9JCN9 74 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 TOMM40O96008 361 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 TWIST1Q15672 202 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 C8orf31Q8N9H6 132 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 RNF182Q8N6D2 247 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 ZC2HC1AQ96GY0 325 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 SHANK2-AS3Q9BTD1 123 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 WNK1Q9H4A3 2382 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 FLNBO75369 2602 aaKnown RBP8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 Q0VG73 95 aa8.23□□□□□ -1.09
CPSF1P1-201ENST00000397477 TRBV19A0A075B6N1 114 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 A0A1B0GUT8 65 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 RPLP1P05386 114 aaKnown RBP8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 CRYGCP07315 174 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 ERCC8Q13216 396 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 RIGQ13278 110 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 LOC102724200A0A096LPH7 203 aaPredicted RBP8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 LINC01548A6NM66 108 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 ATP6V0E1O15342 81 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 OR10J3Q5JRS4 329 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 ZNF562Q6V9R5 426 aa8.22□□□□□ -1.09
CPSF1P1-201ENST00000397477 VWC2LB2RUY7 222 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 SMKR1H3BMG3 65 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 DLEU1O43261 78 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 RPL7P18124 248 aaKnown RBP8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 VPS25Q9BRG1 176 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 NDFIP1Q9BT67 221 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 ZNF462Q96JM2 2506 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 C20orf202A1L168 122 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 C19orf84I3L1E1 186 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 APOHP02749 345 aaPredicted RBP8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 CRYGBP07316 175 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.09
CPSF1P1-201ENST00000397477 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms