RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 I3L2K1 104 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 GPR183P32249 361 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 EXOC3-AS1Q8N2X6 119 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 TMEM133Q9H2Q1 129 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 RNF24Q9Y225 148 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 LYZP61626 148 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 ADORA2A-AS1P86434 159 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 PSG9Q00887 426 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 RNASE6Q93091 150 aaKnown RBP10.53□□□□□ -0.72
TRIM40-207ENST00000396581 SMG1Q96Q15 3661 aaKnown RBP10.53□□□□□ -0.72
TRIM40-207ENST00000396581 HIVEP3Q5T1R4 2406 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 A0A087X0K7 114 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 A0A096LNJ9 63 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 FGF6P10767 208 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 CNTFRP26992 372 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 CSN1S1P47710 185 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 ARF6P62330 175 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 SEC11AP67812 179 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 COTL1Q14019 142 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 OCIAD2Q56VL3 154 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 OR10AG1Q8NH19 301 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
TRIM40-207ENST00000396581 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
TRIM40-207ENST00000396581 U3KQK5 164 aa10.53□□□□□ -0.72
TRIM40-207ENST00000396581 PKDREJQ9NTG1 2253 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 IGHV3-21A0A0B4J1V1 117 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 IGHV3-72A0A0B4J1Y9 119 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 H3BRN7 92 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 ENSAO43768 121 aaKnown RBP10.52□□□□□ -0.73
TRIM40-207ENST00000396581 IGKV1-17P01599 117 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 IGLV1-47P01700 117 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 PPP1R27Q86WC6 154 aa10.52□□□□□ -0.73
TRIM40-207ENST00000396581 SRSF12Q8WXF0 261 aaKnown RBP10.52□□□□□ -0.73
TRIM40-207ENST00000396581 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.73
TRIM40-207ENST00000396581 SPTBN1Q01082 2364 aaKnown RBP10.52□□□□□ -0.73
TRIM40-207ENST00000396581 TRAV8-6A0A0B4J262 113 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 MRPS12O15235 138 aaKnown RBP10.51□□□□□ -0.73
TRIM40-207ENST00000396581 NCR2O95944 276 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 CRIP1P50238 77 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 PSG3Q16557 428 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 ERASQ7Z444 233 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 CSN3P07498 182 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
TRIM40-207ENST00000396581 BPIFA4PQ86YQ2 179 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 OR1N2Q8NGR9 330 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 CCL17Q92583 94 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 RASL11BQ9BPW5 248 aa10.51□□□□□ -0.73
TRIM40-207ENST00000396581 ABCA4P78363 2273 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 CBY3A6NI87 242 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 FAM90A27PA6NNH2 459 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 VSTM5A8MXK1 200 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 FOXE3Q13461 319 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 CDSNQ15517 529 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
TRIM40-207ENST00000396581 K7EQM0 130 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
TRIM40-207ENST00000396581 TMEM97Q5BJF2 176 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 PRSS3P2Q8NHM4 247 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 RNF5Q99942 180 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 APELAP0DMC3 54 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 PAX8Q06710 450 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 LINC01560Q8TB33 94 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
TRIM40-207ENST00000396581 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.48□□□□□ -0.73
TRIM40-207ENST00000396581 GAGE12BA1L429 117 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 C7orf71A4D174 169 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 H0Y8G0 127 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 BUB1B-PAK6H3BSN5 160 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 K7EIM0 57 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 BOD1L2Q8IYS8 172 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 NPFFR1Q9GZQ6 430 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 INSIG2Q9Y5U4 225 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 E7EQL1 145 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 SIVA1O15304 175 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 CD3EP07766 207 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 IFI27P40305 119 aaPredicted RBP10.48□□□□□ -0.73
TRIM40-207ENST00000396581 RNF151Q2KHN1 245 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 ZNF491Q8N8L2 437 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 CFAP46Q8IYW2 2715 aa10.48□□□□□ -0.73
TRIM40-207ENST00000396581 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
TRIM40-207ENST00000396581 WI2-2373I1.2A0A1W2PRP0 233 aa10.47□□□□□ -0.73
TRIM40-207ENST00000396581 H3BRM9 83 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms