RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DIRC3C9JPN6 131 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 J3QLI3 93 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 ZNF253O75346 499 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 DNLZQ5SXM8 178 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 TMEM136Q6ZRR5 245 aa12.57□□□□□ -0.4
SNX6-202ENST00000396526 PIFOQ8TCI5 191 aa12.57□□□□□ -0.4
SNX6-202ENST00000396526 GFRA4Q9GZZ7 299 aa12.57□□□□□ -0.4
SNX6-202ENST00000396526 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
SNX6-202ENST00000396526 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
SNX6-202ENST00000396526 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
SNX6-202ENST00000396526 OR2D3Q8NGH3 330 aa12.57□□□□□ -0.4
SNX6-202ENST00000396526 WIPF2Q8TF74 440 aaPredicted RBP12.57□□□□□ -0.4
SNX6-202ENST00000396526 TPPP2P59282 170 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 SAPCD1Q5SSQ6 148 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 TACC2O95359 2948 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 H3BUA1 57 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 C1orf194Q5T5A4 169 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 NRGNQ92686 78 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 PRSS22Q9GZN4 317 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 USP9XQ93008 2570 aaPredicted RBP12.56□□□□□ -0.4
SNX6-202ENST00000396526 DCHS2Q6V1P9 2916 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 A6NDX4 124 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 Q0VG73 95 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 CIARTQ8N365 385 aaPredicted RBP12.56□□□□□ -0.4
SNX6-202ENST00000396526 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
SNX6-202ENST00000396526 C19orf71A6NCJ1 209 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 M0R3E3 92 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 IGF1P05019 195 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 RBPMS2Q6ZRY4 209 aaKnown RBP12.55□□□□□ -0.4
SNX6-202ENST00000396526 NDFIP1Q9BT67 221 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 SAMD10Q9BYL1 202 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 TGFAP01135 160 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 IGHG2P01859 326 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 CAMPP49913 170 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 SLC50A1Q9BRV3 221 aa12.55□□□□□ -0.4
SNX6-202ENST00000396526 JOSD1Q15040 202 aaPredicted RBP12.54□□□□□ -0.4
SNX6-202ENST00000396526 OR10J3Q5JRS4 329 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
SNX6-202ENST00000396526 LINC00527Q9UJ94 153 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 ZNF462Q96JM2 2506 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 HBBP68871 147 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
SNX6-202ENST00000396526 IGHV3OR16-8A0A075B7F1 116 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 BUB3O43684 328 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 TMEM256Q8N2U0 113 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 ARL3P36405 182 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 KIAA1644Q3SXP7 199 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 TCF24Q7RTU0 167 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 ZFAND3Q9H8U3 227 aa12.53□□□□□ -0.4
SNX6-202ENST00000396526 BEX4Q9NWD9 120 aaPredicted RBP12.53□□□□□ -0.4
SNX6-202ENST00000396526 PF4V1P10720 104 aa12.52□□□□□ -0.4
SNX6-202ENST00000396526 SRIP30626 198 aa12.52□□□□□ -0.4
SNX6-202ENST00000396526 NOL4LQ96MY1 436 aaPredicted RBP12.52□□□□□ -0.4
SNX6-202ENST00000396526 PGLYRP4Q96LB8 373 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 CLEC5AQ9NY25 188 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 CHEK1O14757 476 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 BRI3O95415 125 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 IQCJQ1A5X6 159 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 FAM162BQ5T6X4 162 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 Q6AWC8 147 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 OR5R1Q8NH85 324 aa12.52□□□□□ -0.41
SNX6-202ENST00000396526 NPIPB6E9PJ23 425 aa12.51□□□□□ -0.41
SNX6-202ENST00000396526 LINC00322Q6ZN03 302 aaPredicted RBP12.51□□□□□ -0.41
SNX6-202ENST00000396526 BMI1P35226 326 aa12.51□□□□□ -0.41
SNX6-202ENST00000396526 LOXL1Q08397 574 aaPredicted RBP12.51□□□□□ -0.41
SNX6-202ENST00000396526 RIGQ13278 110 aa12.51□□□□□ -0.41
SNX6-202ENST00000396526 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
SNX6-202ENST00000396526 A0A087X0K7 114 aa12.5□□□□□ -0.41
SNX6-202ENST00000396526 SERF1AO75920 110 aa12.5□□□□□ -0.41
SNX6-202ENST00000396526 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
SNX6-202ENST00000396526 TSTD3H0UI37 97 aa12.5□□□□□ -0.41
SNX6-202ENST00000396526 FAM209BQ5JX69 171 aa12.5□□□□□ -0.41
SNX6-202ENST00000396526 LCN12Q6JVE5 192 aa12.5□□□□□ -0.41
SNX6-202ENST00000396526 A0A1W2PS18 150 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 ESDP10768 282 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 C19orf54Q5BKX5 351 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 SCGB1D1O95968 90 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 A0A1B0GW15 77 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 LRRC75A-AS1Q8N1F1 130 aa12.49□□□□□ -0.41
SNX6-202ENST00000396526 CSPG4Q6UVK1 2322 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 TMEM189A5PLL7 270 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 A8MWP6 167 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 AVPP01185 164 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
SNX6-202ENST00000396526 BLCAPP62952 87 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
SNX6-202ENST00000396526 NDUFA4O00483 81 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms