RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 FMC1Q96HJ9 113 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 FBN2P35556 2912 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 AVPP01185 164 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 GATA3P23771 443 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 KLK9Q2XQG4 91 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 LINC01356Q8N9X3 169 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 C17orf77Q96MU5 243 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 KLK9Q9UKQ9 250 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 KLF12Q9Y4X4 402 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 CSMD2Q7Z408 3487 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 CELSR1Q9NYQ6 3014 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 IGHV3-35A0A0C4DH35 117 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 RPLP1P05386 114 aaKnown RBP9.46□□□□□ -0.89
ITGB1-202ENST00000396033 LINC00614P0C842 121 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 GNB4Q9HAV0 340 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.89
ITGB1-202ENST00000396033 CCL25O15444 150 aa9.46□□□□□ -0.9
ITGB1-202ENST00000396033 RABAC1Q9UI14 185 aa9.46□□□□□ -0.9
ITGB1-202ENST00000396033 NAGKQ9UJ70 344 aa9.46□□□□□ -0.9
ITGB1-202ENST00000396033 MRPS12O15235 138 aaKnown RBP9.45□□□□□ -0.9
ITGB1-202ENST00000396033 TCL1AP56279 114 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 EEF1AKMT3Q96AZ1 226 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 GPR82Q96P67 336 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 POLQO75417 2590 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 CLEC3BP05452 202 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 KRTAP10-9P60411 292 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 MAPK1IP1LQ8NDC0 245 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.45□□□□□ -0.95e-8■■■■□ 22.3
ITGB1-202ENST00000396033 IGHV3OR16-8A0A075B7F1 116 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 GRIFINA4D1Z8 144 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 BMPR1BO00238 502 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 CLEC19AQ6UXS0 136 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 GOLT1AQ6ZVE7 132 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 CCDC140Q96MF4 163 aa9.45□□□□□ -0.9
ITGB1-202ENST00000396033 A0A096LNT2 108 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 A6NDX4 124 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
ITGB1-202ENST00000396033 SIGLEC15Q6ZMC9 328 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 STPG4Q8N801 248 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 ZNF414Q96IQ9 312 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 CENPEQ02224 2701 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 SCGB1D1O95968 90 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 LTAP01374 205 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 IQCJQ1A5X6 159 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 CBLN1P23435 193 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 LYPD1Q8N2G4 141 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 ARL6IP6Q8N6S5 226 aa9.44□□□□□ -0.9
ITGB1-202ENST00000396033 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 SPINK4O60575 86 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 RPL7P18124 248 aaKnown RBP9.43□□□□□ -0.9
ITGB1-202ENST00000396033 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
ITGB1-202ENST00000396033 ZNF705AQ6ZN79 300 aaPredicted RBP9.43□□□□□ -0.9
ITGB1-202ENST00000396033 Q86TA4 180 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 TMEM190Q8WZ59 177 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 TRBV7-1A0A0A6YYK4 115 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 TCF21O43680 179 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
ITGB1-202ENST00000396033 ATP5G2Q06055 141 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 TGFAP01135 160 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 S100A7P31151 101 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 IER3P46695 156 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 SLC35B1P78383 322 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 PDE6HQ13956 83 aa9.43□□□□□ -0.9
ITGB1-202ENST00000396033 PTPN13Q12923 2485 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 RNF223E7ERA6 249 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 M0QZK8 103 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 MLST8Q9BVC4 326 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 AAMDCQ9H7C9 122 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 TP73-AS1Q9UF72 201 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 TRGV3P03979 118 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 CTRLP40313 264 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 GRAMD2BQ96HH9 432 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 FAM223BA6NKX1 122 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
ITGB1-202ENST00000396033 FAM223AQ8IWN6 122 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 TMEM18Q96B42 140 aa9.42□□□□□ -0.9
ITGB1-202ENST00000396033 USP9YO00507 2555 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-202ENST00000396033 SNURFLB1AK76 121 aa9.41□□□□□ -0.9
ITGB1-202ENST00000396033 K7EQM0 130 aa9.41□□□□□ -0.9
ITGB1-202ENST00000396033 IGF1P05019 195 aa9.41□□□□□ -0.9
ITGB1-202ENST00000396033 DEFB113Q30KQ7 82 aa9.41□□□□□ -0.9
ITGB1-202ENST00000396033 C20orf144Q9BQM9 153 aa9.41□□□□□ -0.9
ITGB1-202ENST00000396033 MIEN1Q9BRT3 115 aa9.41□□□□□ -0.9
ITGB1-202ENST00000396033 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
ITGB1-202ENST00000396033 BEX4Q9NWD9 120 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms