RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 TMEM219Q86XT9 240 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 SPXQ9BT56 116 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 MST1LQ2TV78 715 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 FAM231BA6NCW3 169 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 Q6ZWC4 215 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 FREM1Q5H8C1 2179 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 AZU1P20160 251 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 SAA4P35542 130 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 ZFP36L1Q07352 338 aaKnown RBP6.09□□□□□ -1.43
SYNE2-205ENST00000394768 KLF2Q9Y5W3 355 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-205ENST00000394768 PYYP10082 97 aa6.09□□□□□ -1.44
SYNE2-205ENST00000394768 TAL2Q16559 108 aa6.09□□□□□ -1.44
SYNE2-205ENST00000394768 IGKV2-40A0A087WW87 121 aaPredicted RBP6.09□□□□□ -1.44
SYNE2-205ENST00000394768 A0A1W2PRS3 328 aa6.09□□□□□ -1.44
SYNE2-205ENST00000394768 IGKV2D-40P01614 121 aaPredicted RBP6.09□□□□□ -1.44
SYNE2-205ENST00000394768 SEC61GP60059 68 aa6.09□□□□□ -1.44
SYNE2-205ENST00000394768 BVES-AS1Q5T3Y7 98 aa6.09□□□□□ -1.44
SYNE2-205ENST00000394768 ATP6V0BQ99437 205 aa6.09□□□□□ -1.44
SYNE2-205ENST00000394768 A0A1B0GW64 132 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 CDKN1BP46527 198 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 H0YJW9 148 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 FAM201AQ5SY85 155 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 TREML4Q6UXN2 200 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 A0A0G2JMZ2 1700 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 LRRC37A2A6NM11 1700 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 MBD3L4A6NDZ8 208 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-205ENST00000394768 MBD3L3A6NE82 208 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-205ENST00000394768 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-205ENST00000394768 CTSBP07858 339 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 MPV17L2Q567V2 206 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-205ENST00000394768 H3BUA1 57 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 SPRR3Q9UBC9 169 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 WDR83OSQ9Y284 106 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 J3QKU1 62 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 GNLYP22749 145 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 TSSC4Q9Y5U2 329 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-205ENST00000394768 PRTN3P24158 256 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 OR11H6Q8NGC7 330 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 ST6GALNAC6Q969X2 333 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 PIN1P1O15428 100 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 RHOHQ15669 191 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 LINC00114Q6XXX2 140 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 NDUFA4O00483 81 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 SH2D1AO60880 128 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 TRBV6-6A0A0A6YYG2 114 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 A0A0G2JMM0 328 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 A0A1W2PPB8 328 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 KIR3DP1A8MWS1 328 aa6.08□□□□□ -1.44
SYNE2-205ENST00000394768 IGHG4P01861 327 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 C14orf178Q8N769 122 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-205ENST00000394768 TM2D2Q9BX73 214 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 LDLRAD4O15165 306 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 LYZL1Q6UWQ5 148 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 NRTNQ99748 197 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 AGMATQ9BSE5 352 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 NLRC5Q86WI3 1866 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 IGHV3-53P01767 116 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 NPC2P61916 151 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 KLK5Q9Y337 293 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-205ENST00000394768 ZNF474Q6S9Z5 364 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-205ENST00000394768 RLFQ13129 1914 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 NTN3O00634 580 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-205ENST00000394768 FAM110DQ8TAY7 271 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-205ENST00000394768 TRBV24-1A0A075B6N3 115 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 TRAV25A0A0B4J276 109 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 IGHV1-24A0A0C4DH33 117 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 C9JQL5 133 aa6.07□□□□□ -1.44
SYNE2-205ENST00000394768 A6NNC1 897 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 PAQR4Q8N4S7 273 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-205ENST00000394768 CD24P25063 80 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 GUSBP1Q15486 140 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 C1QL2Q7Z5L3 287 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 LMO1P25800 156 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 SYNJ2BPP57105 145 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 UBE2E2Q96LR5 201 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 CCL18P55774 89 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 NABP1Q96AH0 204 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 SCRT1Q9BWW7 348 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 F8VVB4 439 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 F8VWA3 439 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 CRYGSP22914 178 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 MP68P56378 58 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 FOXL2P58012 376 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 ID3Q02535 119 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 EXOC3-AS1Q8N2X6 119 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 TMEM105Q8N8V8 129 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 A0A0G2JNJ9 132 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 SCRT2Q9NQ03 307 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 Q9UFV3 132 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 YPEL3P61236 119 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-205ENST00000394768 C9orf153Q5TBE3 101 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 SPG11Q96JI7 2443 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 CLPSP04118 112 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 CFHR2P36980 270 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 KIR2DL5BQ8NHK3 375 aa6.06□□□□□ -1.44
SYNE2-205ENST00000394768 C1orf43Q9BWL3 253 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms