RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CTSGP08311 255 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 LINC00322Q6ZN03 302 aaPredicted RBP8.71□□□□□ -1.01
TCOF1-203ENST00000394269 GPR82Q96P67 336 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.01
TCOF1-203ENST00000394269 ZNF331Q9NQX6 463 aaPredicted RBP8.71□□□□□ -1.01
TCOF1-203ENST00000394269 J3QKU1 62 aa8.71□□□□□ -1.02
TCOF1-203ENST00000394269 NUPR1O60356 82 aa8.71□□□□□ -1.02
TCOF1-203ENST00000394269 TGFAP01135 160 aa8.71□□□□□ -1.02
TCOF1-203ENST00000394269 TMEM183AQ8IXX5 376 aa8.71□□□□□ -1.02
TCOF1-203ENST00000394269 OSTCQ9NRP0 149 aa8.71□□□□□ -1.02
TCOF1-203ENST00000394269 TMSB15BA0A087X1C1 80 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 MSMBP08118 114 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 CRISP2P16562 243 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 BLCAPP62952 87 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 PAX8Q06710 450 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 EBI3Q14213 229 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 IGKV3-7A0A075B6H7 116 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 TRAV30A0A087WSZ9 112 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 ZNF785A8K8V0 405 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 HIGD1CA8MV81 97 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 F8W735 103 aaPredicted RBP8.7□□□□□ -1.02
TCOF1-203ENST00000394269 AVPP01185 164 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 AMBPP02760 352 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 TMEM183BQ1AE95 376 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 OR2D3Q8NGH3 330 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 LY96Q9Y6Y9 160 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 F2Z2F3 143 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 P01737 135 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 TYMSP04818 313 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 HLA-DMBP28068 263 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 PLP1P60201 277 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
TCOF1-203ENST00000394269 TRBV19A0A075B6N1 114 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 RPL19P84098 196 aaKnown RBP8.69□□□□□ -1.02
TCOF1-203ENST00000394269 NEU1Q99519 415 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 AAMDCQ9H7C9 122 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 NF1P21359 2839 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 ZNF705FA8MVS1 300 aaPredicted RBP8.69□□□□□ -1.02
TCOF1-203ENST00000394269 MYCNOSP40205 109 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 KRTAP10-9P60411 292 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 MUC21Q5SSG8 566 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 PRO1933Q9H354 126 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 OTORQ9NRC9 128 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 RABAC1Q9UI14 185 aa8.69□□□□□ -1.02
TCOF1-203ENST00000394269 H3BRN7 92 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 TRGV3P03979 118 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 CFAP161Q6P656 301 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 TOMM20LQ6UXN7 152 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 Q6ZS46 218 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 C5orf56Q8N8D9 126 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 APCP25054 2843 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 IGKV2-40A0A087WW87 121 aaPredicted RBP8.68□□□□□ -1.02
TCOF1-203ENST00000394269 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 IGKV2D-40P01614 121 aaPredicted RBP8.68□□□□□ -1.02
TCOF1-203ENST00000394269 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
TCOF1-203ENST00000394269 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
TCOF1-203ENST00000394269 TRAV41A0A0B4J266 112 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 PF4V1P10720 104 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 SRIP30626 198 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 TPPP2P59282 170 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
TCOF1-203ENST00000394269 ZNF414Q96IQ9 312 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 MOB4Q9Y3A3 225 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 K7EQM0 130 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 CSN1S1P47710 185 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 ARL6IP6Q8N6S5 226 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 Q8TAT8 98 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 FAM110DQ8TAY7 271 aaPredicted RBP8.67□□□□□ -1.02
TCOF1-203ENST00000394269 TMEM18Q96B42 140 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 SORL1Q92673 2214 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 B4DSR2 109 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 BMPR1BO00238 502 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 ZNF253O75346 499 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 ATP5G2Q06055 141 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 TMEM95Q3KNT9 176 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 OR5R1Q8NH85 324 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 FMC1Q96HJ9 113 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 C14orf144Q96I85 54 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
TCOF1-203ENST00000394269 TIMM8BQ9Y5J9 83 aaPredicted RBP8.67□□□□□ -1.02
TCOF1-203ENST00000394269 SERF1AO75920 110 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 GOSR1O95249 250 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 SIGLEC15Q6ZMC9 328 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 RNF182Q8N6D2 247 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 PIFOQ8TCI5 191 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 MXRA5Q9NR99 2828 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 NDUFS8O00217 210 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 APCSP02743 223 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 APOHP02749 345 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-203ENST00000394269 IGLC2P0DOY2 106 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.02
TCOF1-203ENST00000394269 GRAMD2BQ96HH9 432 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 C8orf49Q96NF6 230 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms