RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 C1orf194Q5T5A4 169 aa17.66■□□□□ 0.42
CNN3-202ENST00000394202 TMEM88Q6PEY1 159 aa17.66■□□□□ 0.42
CNN3-202ENST00000394202 RXFP4Q8TDU9 374 aa17.66■□□□□ 0.42
CNN3-202ENST00000394202 HIST1H1EP10412 219 aaKnown RBP17.66■□□□□ 0.42
CNN3-202ENST00000394202 RPL7P18124 248 aaKnown RBP17.66■□□□□ 0.42
CNN3-202ENST00000394202 OR9G4Q8NGQ1 327 aa17.66■□□□□ 0.42
CNN3-202ENST00000394202 TRRAPQ9Y4A5 3859 aa17.65■□□□□ 0.42
CNN3-202ENST00000394202 CBLN1P23435 193 aa17.65■□□□□ 0.42
CNN3-202ENST00000394202 ATP5G3P48201 142 aa17.65■□□□□ 0.42
CNN3-202ENST00000394202 ZNF506Q5JVG8 444 aa17.65■□□□□ 0.42
CNN3-202ENST00000394202 OR4F17Q8NGA8 305 aa17.65■□□□□ 0.42
CNN3-202ENST00000394202 OR4F4Q96R69 305 aa17.65■□□□□ 0.42
CNN3-202ENST00000394202 SLC17A3O00476 420 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 NDUFB4O95168 129 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 PEA15Q15121 130 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 CST9LP1Q5W188 147 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 CBLN2Q8IUK8 224 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 MANBALQ9NQG1 85 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 PRELID1Q9Y255 219 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 FOLR2P14207 255 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 S100A7P31151 101 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 RANP62826 216 aaKnown RBP17.64■□□□□ 0.41
CNN3-202ENST00000394202 ELOVL1Q9BW60 279 aa17.64■□□□□ 0.41
CNN3-202ENST00000394202 TRBV19A0A075B6N1 114 aa17.63■□□□□ 0.41
CNN3-202ENST00000394202 CD81P60033 236 aa17.63■□□□□ 0.41
CNN3-202ENST00000394202 VAX2Q9UIW0 290 aa17.63■□□□□ 0.41
CNN3-202ENST00000394202 A0A1W2PS18 150 aa17.62■□□□□ 0.41
CNN3-202ENST00000394202 GGTLC3B5MD39 225 aa17.62■□□□□ 0.41
CNN3-202ENST00000394202 IFNA1P01562 189 aa17.62■□□□□ 0.41
CNN3-202ENST00000394202 SIGLEC15Q6ZMC9 328 aa17.62■□□□□ 0.41
CNN3-202ENST00000394202 PPT1P50897 306 aa17.62■□□□□ 0.41
CNN3-202ENST00000394202 MLXQ9UH92 298 aa17.62■□□□□ 0.41
CNN3-202ENST00000394202 C11orf94C9JXX5 98 aa17.61■□□□□ 0.41
CNN3-202ENST00000394202 CSN3P07498 182 aa17.61■□□□□ 0.41
CNN3-202ENST00000394202 MYCNOSP40205 109 aa17.61■□□□□ 0.41
CNN3-202ENST00000394202 MEF2BQ02080 365 aaPredicted RBP17.61■□□□□ 0.41
CNN3-202ENST00000394202 RNF24Q9Y225 148 aa17.61■□□□□ 0.41
CNN3-202ENST00000394202 ZNF785A8K8V0 405 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 PRB4P10163 310 aaPredicted RBP17.6■□□□□ 0.41
CNN3-202ENST00000394202 GALR1P47211 349 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 SUMO1P63165 101 aaKnown RBP17.6■□□□□ 0.41
CNN3-202ENST00000394202 GRAMD2BQ96HH9 432 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 GPR82Q96P67 336 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 IGKV3-7A0A075B6H7 116 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 A0A1W2PRE2 83 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 IGFL4Q6B9Z1 124 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 EXOC3-AS1Q8N2X6 119 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 PEMTQ9UBM1 199 aa17.6■□□□□ 0.41
CNN3-202ENST00000394202 OVOL1O14753 267 aa17.59■□□□□ 0.41
CNN3-202ENST00000394202 RPL11P62913 178 aaKnown RBP17.59■□□□□ 0.41
CNN3-202ENST00000394202 TCF24Q7RTU0 167 aa17.59■□□□□ 0.41
CNN3-202ENST00000394202 Q9H3A6 140 aa17.59■□□□□ 0.41
CNN3-202ENST00000394202 SMDT1Q9H4I9 107 aa17.59■□□□□ 0.41
CNN3-202ENST00000394202 SRP19P09132 144 aaKnown RBP17.58■□□□□ 0.4
CNN3-202ENST00000394202 FAM90A2PQ658T7 463 aa17.58■□□□□ 0.4
CNN3-202ENST00000394202 SPATA3Q8NHX4 192 aa17.58■□□□□ 0.4
CNN3-202ENST00000394202 TMEM158Q8WZ71 300 aa17.58■□□□□ 0.4
CNN3-202ENST00000394202 SMCO4Q9NRQ5 59 aa17.58■□□□□ 0.4
CNN3-202ENST00000394202 A0A087X0K7 114 aa17.57■□□□□ 0.4
CNN3-202ENST00000394202 ARL2-SNX15V9GYD0 113 aa17.57■□□□□ 0.4
CNN3-202ENST00000394202 PGPA6NDG6 321 aa17.57■□□□□ 0.4
CNN3-202ENST00000394202 ZNF747Q9BV97 191 aa17.57■□□□□ 0.4
CNN3-202ENST00000394202 HLA-DMBP28068 263 aa17.56■□□□□ 0.4
CNN3-202ENST00000394202 LURAP1LQ8IV03 231 aa17.56■□□□□ 0.4
CNN3-202ENST00000394202 CYB561D1Q8N8Q1 229 aa17.56■□□□□ 0.4
CNN3-202ENST00000394202 PF4P02776 101 aa17.55■□□□□ 0.4
CNN3-202ENST00000394202 TAGLN2P37802 199 aaKnown RBP17.55■□□□□ 0.4
CNN3-202ENST00000394202 CEBPGP53567 150 aa17.55■□□□□ 0.4
CNN3-202ENST00000394202 PDE6HQ13956 83 aa17.55■□□□□ 0.4
CNN3-202ENST00000394202 GBGT1Q8N5D6 347 aa17.55■□□□□ 0.4
CNN3-202ENST00000394202 LINC00482Q8N8I6 264 aa17.55■□□□□ 0.4
CNN3-202ENST00000394202 SCO2A0A1W2PP80 73 aa17.55■□□□□ 0.4
CNN3-202ENST00000394202 ZNF331Q9NQX6 463 aaPredicted RBP17.55■□□□□ 0.4
CNN3-202ENST00000394202 TRAV8-2A0A0B4J237 113 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 HELTA6NFD8 242 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 M0R3E3 92 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 GNG5P63218 68 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 RNF182Q8N6D2 247 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 C3orf56Q8N813 242 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 C15orf54Q8N8G6 183 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 SLC35B3Q9H1N7 401 aa17.54■□□□□ 0.4
CNN3-202ENST00000394202 BMI1P35226 326 aa17.53■□□□□ 0.4
CNN3-202ENST00000394202 NRN1Q9NPD7 142 aa17.53■□□□□ 0.4
CNN3-202ENST00000394202 OTORQ9NRC9 128 aa17.53■□□□□ 0.4
CNN3-202ENST00000394202 M0QZ24 198 aa17.53■□□□□ 0.4
CNN3-202ENST00000394202 DERL1Q9BUN8 251 aa17.53■□□□□ 0.4
CNN3-202ENST00000394202 COLCA2A8K830 154 aa17.52■□□□□ 0.4
CNN3-202ENST00000394202 SOCS3O14543 225 aa17.52■□□□□ 0.4
CNN3-202ENST00000394202 DEFB114Q30KQ6 69 aa17.52■□□□□ 0.4
CNN3-202ENST00000394202 C12orf54Q6X4T0 127 aa17.52■□□□□ 0.4
CNN3-202ENST00000394202 SLC25A5P05141 298 aaKnown RBP17.51■□□□□ 0.39
CNN3-202ENST00000394202 WFDC3Q8IUB2 231 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 LYPD1Q8N2G4 141 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 TXNDC17Q9BRA2 123 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 MS4A6AQ9H2W1 248 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 TUBA4BQ9H853 241 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 NOTCH3Q9UM47 2321 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 ZNF705FA8MVS1 300 aaPredicted RBP17.51■□□□□ 0.39
CNN3-202ENST00000394202 PDE6DO43924 150 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms