RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 UBE2E1P51965 193 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 MMDQ15546 238 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 PRR27Q6MZM9 219 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 Q6ZN92 141 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 TEX45Q8NA69 505 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 CFHR4Q92496 578 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 FMC1Q96HJ9 113 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 Q96MF0 132 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 LAMTOR2Q9Y2Q5 125 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 MRPS16Q9Y3D3 137 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 PLXNB1O43157 2135 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 FLNBO75369 2602 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 AKAP9Q99996 3911 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 PGPA6NDG6 321 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 M0R2Z0 102 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 CORTO00230 105 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 SAA4P35542 130 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 ASPHD1Q5U4P2 390 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 C5orf17Q8NAS9 161 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 TMEM116Q8NCL8 245 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 WNT10AQ9GZT5 417 aa15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 RPP21Q9H633 154 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-203ENST00000392334 CENPVL3A0A0U1RRI6 287 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 IGHV3-48P01763 117 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 NBEAP1P0C6P0 100 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 HBBP68871 147 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 PAX8Q06710 450 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 C22orf15Q8WYQ4 148 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 CR1P17927 2039 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 TRAV9-2A0A087WT02 112 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 C19orf71A6NCJ1 209 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 C2orf70A6NJV1 201 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 A8MWL6 223 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 MOSP00540 346 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 LTAP01374 205 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 GP9P14770 177 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 PLGLAQ15195 96 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 RUSC1-AS1Q66K80 236 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 EBLN2Q6P2I7 272 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 OR1B1Q8NGR6 318 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 GFRA4Q9GZZ7 299 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 C1RLQ9NZP8 487 aa15.67■□□□□ 0.1
CSNK1D-203ENST00000392334 MSMBP08118 114 aa15.66■□□□□ 0.1
CSNK1D-203ENST00000392334 ORM2P19652 201 aa15.66■□□□□ 0.1
CSNK1D-203ENST00000392334 BRD3OSQ6XYD6 125 aa15.66■□□□□ 0.1
CSNK1D-203ENST00000392334 WFDC11Q8NEX6 87 aa15.66■□□□□ 0.1
CSNK1D-203ENST00000392334 SIGLEC9Q9Y336 463 aa15.66■□□□□ 0.1
CSNK1D-203ENST00000392334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.66■□□□□ 0.13e-8■■■■□ 20.1
CSNK1D-203ENST00000392334 TEX15Q9BXT5 2789 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 CRYGBP07316 175 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 TMEM190Q8WZ59 177 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 AJUBAQ96IF1 538 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 CREBBPQ92793 2442 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 FAM231BA6NCW3 169 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 TSPOP30536 169 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 CAMPP49913 170 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 STPG4Q8N801 248 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 BLNKQ8WV28 456 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 SSBP4Q9BWG4 385 aaPredicted RBP15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 HIF1ANQ9NWT6 349 aa15.65■□□□□ 0.1
CSNK1D-203ENST00000392334 TRAV40A0A0B4J280 105 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 RPL27AP46776 148 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 TFPI2P48307 235 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 FAM120AOSQ5T036 256 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 MINOS1Q5TGZ0 78 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 LCN12Q6JVE5 192 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 RNASEKQ6P5S7 137 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 PPP1R27Q86WC6 154 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 URB1-AS1Q96HZ7 61 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 MINOS1-NBL1R4GNA1 71 aa15.64■□□□□ 0.09
CSNK1D-203ENST00000392334 NPFFO15130 113 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 TCRAP04437 139 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 PRSS57Q6UWY2 283 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 CHCHD1Q96BP2 118 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 FLNAP21333 2647 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 DMRTA1Q5VZB9 504 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 CYB5R2Q6BCY4 276 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 CCDC144NLQ6NUI1 221 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 LINC00322Q6ZN03 302 aaPredicted RBP15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 TCF24Q7RTU0 167 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 MYO9AB2RTY4 2548 aa15.63■□□□□ 0.09
CSNK1D-203ENST00000392334 BAHCC1Q9P281 2608 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 NCBP2LA6PVI3 153 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 B4DSR2 109 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 NPIPB6E9PJ23 425 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 CRXO43186 299 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 NDUFB8O95169 186 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 P01737 135 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 IGHV4-38-2P0DP08 117 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 GTSF1Q8WW33 167 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 Q9H3A6 140 aa15.62■□□□□ 0.09
CSNK1D-203ENST00000392334 ATOH7Q8N100 152 aa15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 ORAOV1Q8WV07 137 aa15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 TMEM14CQ9P0S9 112 aa15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 TRBV6-1A0A0K0K1D8 114 aa15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 NBR2O15453 112 aa15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 AVPP01185 164 aa15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 LOXL1Q08397 574 aaPredicted RBP15.61■□□□□ 0.09
CSNK1D-203ENST00000392334 RBPMS2Q6ZRY4 209 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms