RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 A0A0G2JLM5 398 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 DIRC3C9JPN6 131 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 ARL3P36405 182 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 SERTAD4Q9NUC0 356 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 ZFP30Q9Y2G7 519 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 U3KQE9 123 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 CSN1S1P47710 185 aa13.33□□□□□ -0.28
RPAIN-203ENST00000381209 AKR1D1P51857 326 aa13.33□□□□□ -0.28
RPAIN-203ENST00000381209 SGK494Q96LW2 274 aa13.33□□□□□ -0.28
RPAIN-203ENST00000381209 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
RPAIN-203ENST00000381209 TMEM89A2RUT3 159 aa13.32□□□□□ -0.28
RPAIN-203ENST00000381209 PF4V1P10720 104 aa13.32□□□□□ -0.28
RPAIN-203ENST00000381209 PSG3Q16557 428 aa13.32□□□□□ -0.28
RPAIN-203ENST00000381209 COX19Q49B96 90 aa13.32□□□□□ -0.28
RPAIN-203ENST00000381209 TEX29Q8N6K0 151 aa13.32□□□□□ -0.28
RPAIN-203ENST00000381209 ASH1LQ9NR48 2969 aaKnown RBP13.32□□□□□ -0.28
RPAIN-203ENST00000381209 IGHV3OR16-8A0A075B7F1 116 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 C19orf71A6NCJ1 209 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 FBLL1A6NHQ2 334 aaKnown RBP13.31□□□□□ -0.28
RPAIN-203ENST00000381209 NDUFA4O00483 81 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 CDX1P47902 265 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-203ENST00000381209 MEOX2P50222 304 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 CT83Q5H943 113 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 FAM209BQ5JX69 171 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 PRR27Q6MZM9 219 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 PRSS22Q9GZN4 317 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 KLK15Q9H2R5 256 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 PSG8Q9UQ74 426 aa13.31□□□□□ -0.28
RPAIN-203ENST00000381209 KMT2BQ9UMN6 2715 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-203ENST00000381209 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
RPAIN-203ENST00000381209 IGHG4P01861 327 aa13.3□□□□□ -0.28
RPAIN-203ENST00000381209 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
RPAIN-203ENST00000381209 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-203ENST00000381209 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.3□□□□□ -0.281e-8■■■□□ 16.6
RPAIN-203ENST00000381209 IZUMO1RA6ND01 250 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 ZNF785A8K8V0 405 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 M0R3E3 92 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 S100A8P05109 93 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 HIST2H2BCQ6DN03 193 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 COA6Q5JTJ3 125 aaKnown RBP13.29□□□□□ -0.28
RPAIN-203ENST00000381209 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 LINC00518Q8N0U6 118 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 OR4X2Q8NGF9 303 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
RPAIN-203ENST00000381209 SLC50A1Q9BRV3 221 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 GNB1LQ9BYB4 327 aa13.29□□□□□ -0.28
RPAIN-203ENST00000381209 RPP21Q9H633 154 aaKnown RBP13.29□□□□□ -0.28
RPAIN-203ENST00000381209 USP9YO00507 2555 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-203ENST00000381209 PTPN13Q12923 2485 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 P01737 135 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 PSMB8P28062 276 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 LINC00322Q6ZN03 302 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-203ENST00000381209 WFDC11Q8NEX6 87 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 OR4B1Q8NGF8 309 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 NAT8BQ9UHF3 227 aa13.28□□□□□ -0.28
RPAIN-203ENST00000381209 UTP20O75691 2785 aaKnown RBP13.28□□□□□ -0.28
RPAIN-203ENST00000381209 CA1P00915 261 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-203ENST00000381209 TRBV12-3P01733 135 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 APOHP02749 345 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-203ENST00000381209 MT-ND6P03923 174 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 TCL1AP56279 114 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 RASL11AQ6T310 242 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 C16orf54Q6UWD8 224 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 CIARTQ8N365 385 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-203ENST00000381209 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 NPFFR1Q9GZQ6 430 aa13.27□□□□□ -0.29
RPAIN-203ENST00000381209 NAV2Q8IVL1 2488 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 A8MWL6 223 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 CHEK1O14757 476 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-203ENST00000381209 IGHV3-11P01762 117 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 CBLN1P23435 193 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 COX8CQ7Z4L0 72 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 HIST3H2BBQ8N257 126 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 GFRA4Q9GZZ7 299 aa13.26□□□□□ -0.29
RPAIN-203ENST00000381209 XKRY2A2RUG3 117 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 ZNF207O43670 478 aaKnown RBP13.25□□□□□ -0.29
RPAIN-203ENST00000381209 TMEM95Q3KNT9 176 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 WIPF2Q8TF74 440 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-203ENST00000381209 GLMPQ8WWB7 406 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 MRPL53Q96EL3 112 aaKnown RBP13.25□□□□□ -0.29
RPAIN-203ENST00000381209 NEU1Q99519 415 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 FOXC2Q99958 501 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
RPAIN-203ENST00000381209 CLEC5AQ9NY25 188 aa13.25□□□□□ -0.29
RPAIN-203ENST00000381209 IGHV3-66A0A0C4DH42 116 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 SAPCD1Q5SSQ6 148 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 LCN12Q6JVE5 192 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 UNQ9165/PRO28630Q6UXU0 137 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 NUP35Q8NFH5 326 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 ZC2HC1AQ96GY0 325 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 ZNF702PQ9H963 129 aa13.24□□□□□ -0.29
RPAIN-203ENST00000381209 PEF1Q9UBV8 284 aaKnown RBP13.24□□□□□ -0.29
RPAIN-203ENST00000381209 ANKRD17O75179 2603 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms