RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 IGHV3-73A0A0B4J1V6 119 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 E7EQL1 145 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 SAA4P35542 130 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 FXYD7P58549 80 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 CKS1BP61024 79 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 AMN1Q8IY45 258 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 CSTL1Q9H114 145 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 DOCK7Q96N67 2140 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 LY6HO94772 140 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 MST1LQ2TV78 715 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 DTX1Q86Y01 620 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
COL2A1-202ENST00000380518 ANK1P16157 1881 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.332e-9■■■□□ 16.7
COL2A1-202ENST00000380518 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 RASL10AQ92737 203 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 BPESC1Q9GZL8 116 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 ARTNQ5T4W7 220 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-202ENST00000380518 DAZ1Q9NQZ3 744 aaKnown RBP12.99□□□□□ -0.33
COL2A1-202ENST00000380518 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 MPV17L2Q567V2 206 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 VGLL1Q99990 258 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 TMEM14BQ9NUH8 114 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 NAA38Q9BRA0 125 aaKnown RBP12.98□□□□□ -0.33
COL2A1-202ENST00000380518 JPT2Q9H910 190 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 SLC25A16P16260 332 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 C1QTNF4Q9BXJ3 329 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 A0A087X0K7 114 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 DLEU1O43261 78 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 NCOR1P1Q9H4R4 102 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 ARFGEF3Q5TH69 2177 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 OVOL3O00110 214 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 INSP01308 110 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 GATA4P43694 442 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF124Q15973 351 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 C9JQL5 133 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 PAX4O43316 350 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 TDGF1P3P51864 188 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 Q0VG73 95 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF492Q9P255 531 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 FAM231BA6NCW3 169 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 LIME1Q9H400 295 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.33
COL2A1-202ENST00000380518 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.33
COL2A1-202ENST00000380518 NDUFB8O95169 186 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 Q8TCH9 128 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 C1orf159Q96HA4 380 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 ANAPC13Q9BS18 74 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 DEFB104AQ8WTQ1 72 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-202ENST00000380518 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 KLHL30-AS1Q8NEE0 82 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 CST9LQ9H4G1 147 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
COL2A1-202ENST00000380518 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 DOCK8Q8NF50 2099 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 TCF20Q9UGU0 1960 aaKnown RBP12.94□□□□□ -0.34
COL2A1-202ENST00000380518 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 UBE2E1P51965 193 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 FAM110DQ8TAY7 271 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-202ENST00000380518 PAX9P55771 341 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 CT83Q5H943 113 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 NDUFS8O00217 210 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 NPC2P61916 151 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 ERCC8Q13216 396 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 Q6ZR03 302 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 LY6G5BQ8NDX9 201 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 VWA8A3KMH1 1905 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 A0A087WWL8 130 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-202ENST00000380518 PROK2Q9HC23 129 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-202ENST00000380518 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
COL2A1-202ENST00000380518 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 PCNX1Q96RV3 2341 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 RNF166Q96A37 237 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-202ENST00000380518 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 SYNJ2BPP57105 145 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 UBE2E2Q96LR5 201 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms