RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 C18orf12Q96KH6 178 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 ARMS2P0C7Q2 107 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 SMIM10L1P0DMW3 83 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 C20orf204Q6ZNR8 217 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 TSKUQ8WUA8 353 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 TMEM170AQ8WVE7 144 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 SMIM10Q96HG1 83 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 CHD3Q12873 2000 aaKnown RBP10.12□□□□□ -0.79
CHD3-203ENST00000380358 EGR2P11161 476 aaPredicted RBP10.12□□□□□ -0.79
CHD3-203ENST00000380358 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 SVIPQ8NHG7 77 aa10.12□□□□□ -0.79
CHD3-203ENST00000380358 PCNX2A6NKB5 2137 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 HGFACQ04756 655 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 TM2D1Q9BX74 207 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 DOCK8Q8NF50 2099 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 IGKV1D-12P01611 117 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 PPBPP02775 128 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
CHD3-203ENST00000380358 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
CHD3-203ENST00000380358 COL11A1P12107 1806 aaPredicted RBP10.11□□□□□ -0.79
CHD3-203ENST00000380358 J3QKU1 62 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 HSD52Q0P140 79 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 ATRAIDQ6UW56 229 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 LINC00479Q96M42 142 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
CHD3-203ENST00000380358 BUB3O43684 328 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 TRACP01848 142 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 C5orf64Q2M2E5 130 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 CD177Q8N6Q3 437 aa10.11□□□□□ -0.79
CHD3-203ENST00000380358 RNASE2P10153 161 aaKnown RBP10.1□□□□□ -0.79
CHD3-203ENST00000380358 C8orf31Q8N9H6 132 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
CHD3-203ENST00000380358 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 WFDC1Q9HC57 220 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 TRBV6-7A0A0A0MS04 114 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 MSMBP08118 114 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 NHLRC3Q5JS37 347 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 MAJINQ3KP22 176 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 SPRY2O43597 315 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 WFDC11Q8NEX6 87 aa10.1□□□□□ -0.79
CHD3-203ENST00000380358 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
CHD3-203ENST00000380358 DAZ1Q9NQZ3 744 aaKnown RBP10.09□□□□□ -0.79
CHD3-203ENST00000380358 NOTCH3Q9UM47 2321 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 ZNF503Q96F45 646 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 ATAD5Q96QE3 1844 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 TMEM213A2RRL7 107 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 DEFB4AO15263 64 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 WFDC9Q8NEX5 89 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 CACNA1EQ15878 2313 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 CD59P13987 128 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 RNF183Q96D59 192 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 KMT2EQ8IZD2 1858 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 CTHRC1Q96CG8 243 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 RMI2Q96E14 147 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 LTBP4Q8N2S1 1624 aa10.09□□□□□ -0.79
CHD3-203ENST00000380358 A0A1B0GWJ7 208 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 KIR3DS1Q14943 382 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 ZC2HC1BQ5TFG8 222 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 ZNF236Q9UL36 1845 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 IGKV1D-8A0A087WSZ0 117 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 TREML4Q6UXN2 200 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
CHD3-203ENST00000380358 TIRAPP58753 221 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 ID3Q02535 119 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 ARTNQ5T4W7 220 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 A0A0A6YYD4 124 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 RBM3P98179 157 aaKnown RBP10.08□□□□□ -0.8
CHD3-203ENST00000380358 UBL5Q9BZL1 73 aa10.08□□□□□ -0.8
CHD3-203ENST00000380358 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 STRCQ7RTU9 1775 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 ATRXP46100 2492 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 USMG5Q96IX5 58 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 H0YJW9 148 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
CHD3-203ENST00000380358 FAM223BA6NKX1 122 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 FAM223AQ8IWN6 122 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 GNB1LQ9BYB4 327 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
CHD3-203ENST00000380358 AHDC1Q5TGY3 1603 aaPredicted RBP10.06□□□□□ -0.8
CHD3-203ENST00000380358 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 A0A087WW49 117 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 E7EQL1 145 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 GREM1O60565 184 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 SCN5AQ14524 2016 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 SHISA3A0PJX4 238 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 UBE2AP49459 152 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
CHD3-203ENST00000380358 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
CHD3-203ENST00000380358 MINOS1Q5TGZ0 78 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 TEX36Q5VZQ5 186 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms