RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 MLST8Q9BVC4 326 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 SMPXQ9UHP9 88 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 CELSR2Q9HCU4 2923 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 CBY3A6NI87 242 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 AMY1AP04745 511 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 CCDC144NLQ6NUI1 221 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 NUP35Q8NFH5 326 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 GPR82Q96P67 336 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 SHANK2-AS3Q9BTD1 123 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 NDUFAF3Q9BU61 184 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV7-81A0A0B4J1V7 117 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 IZUMO1RA6ND01 250 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 NPIPB5A8MRT5 1133 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 NDUFB8O95169 186 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 TOMM40O96008 361 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 HIST1H1EP10412 219 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 MINOS1Q5TGZ0 78 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 GDF5OSQ5U4N7 250 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 Q8N9W7 124 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 CMTM2Q8TAZ6 248 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 HSPB9Q9BQS6 159 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 GNB4Q9HAV0 340 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 TMEM14CQ9P0S9 112 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 MINOS1-NBL1R4GNA1 71 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 SPG11Q96JI7 2443 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 TRBV9A0A0B4J1U6 114 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 WI2-2373I1.2A0A1W2PRP0 233 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 H3BRN7 92 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 GNG7O60262 68 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 OR2J3O76001 311 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 LTAP01374 205 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 IGLV2-11P01706 119 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 FCGR2BP31994 310 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 SAA4P35542 130 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 ZNF664Q8N3J9 261 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 TTC9CQ8N5M4 171 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 GRAMD2BQ96HH9 432 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 NOL4LQ96MY1 436 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 SH2D7A6NKC9 451 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 BMPR1BO00238 502 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 IGLC2P0DOY2 106 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 GOLT1AQ6ZVE7 132 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 BAGE3Q86Y29 109 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 RCHY1Q96PM5 261 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 OTORQ9NRC9 128 aa6.24□□□□□ -1.41
PDLIM5-204ENST00000380176 TRBV19A0A075B6N1 114 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 OR2T8A6NH00 312 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 OOSP1A8MZH6 123 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 OVOL3O00110 214 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV4-39P01824 125 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 UBE2E1P51965 193 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 Q56UQ5 140 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 TCF24Q7RTU0 167 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 CIARTQ8N365 385 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 FMC1Q96HJ9 113 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 USP9XQ93008 2570 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 LINC01548A6NM66 108 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 ZNF785A8K8V0 405 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 MT-ND6P03923 174 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 SRIP30626 198 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 MFAP4P55083 255 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 Q0VG73 95 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 Q6ZWC4 215 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 S100A7AQ86SG5 101 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 PRNTQ86SH4 94 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 BPIFA4PQ86YQ2 179 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 MS4A10Q96PG2 267 aa6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 SSBP4Q9BWG4 385 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV3OR16-10A0A075B7F0 116 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV3OR16-8A0A075B7F1 116 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV3-35A0A0C4DH35 117 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 C19orf71A6NCJ1 209 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 ESDP10768 282 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 SIGLEC15Q6ZMC9 328 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 Q86TA4 180 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 GTSF1Q8WW33 167 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 ZNF414Q96IQ9 312 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 CHRDL1Q9BU40 450 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 PRSS22Q9GZN4 317 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 ZNF331Q9NQX6 463 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 HIF1ANQ9NWT6 349 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 C21orf62Q9NYP8 219 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 TBL2Q9Y4P3 447 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 M0R3E3 92 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 HLA-DQA1P01909 254 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 HLA-DRB1P01911 266 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 FAM106CPP0CH98 169 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 CAMPP49913 170 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 GLMPQ8WWB7 406 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 VCX2Q9H322 139 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 ACACBO00763 2458 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 CENPVL3A0A0U1RRI6 287 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 APCSP02743 223 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 CTSGP08311 255 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 RPL19P84098 196 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 311.1 ms