RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 APCSP02743 223 aa16.87■□□□□ 0.29
TRIM54-202ENST00000380075 SAA4P35542 130 aa16.87■□□□□ 0.29
TRIM54-202ENST00000380075 VN1R17PQ8TDU5 208 aa16.87■□□□□ 0.29
TRIM54-202ENST00000380075 NEU1Q99519 415 aa16.87■□□□□ 0.29
TRIM54-202ENST00000380075 GFRA4Q9GZZ7 299 aa16.87■□□□□ 0.29
TRIM54-202ENST00000380075 FAM231BA6NCW3 169 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 P01737 135 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 LINC00310P59036 64 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 TMEM75Q8N9X5 138 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 FAM110DQ8TAY7 271 aaPredicted RBP16.86■□□□□ 0.29
TRIM54-202ENST00000380075 DAZAP1Q96EP5 407 aaKnown RBP16.86■□□□□ 0.29
TRIM54-202ENST00000380075 ITPR3Q14573 2671 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 BMPR1BO00238 502 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 SIGLEC15Q6ZMC9 328 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 OR4B1Q8NGF8 309 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 GNB4Q9HAV0 340 aa16.86■□□□□ 0.29
TRIM54-202ENST00000380075 HIGD1CA8MV81 97 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 RNF223E7ERA6 249 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 NPFFO15130 113 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 NDUFB8O95169 186 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 GOLT1AQ6ZVE7 132 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 EXOC3-AS1Q8N2X6 119 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 SGK494Q96LW2 274 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 ZFP30Q9Y2G7 519 aa16.85■□□□□ 0.29
TRIM54-202ENST00000380075 TRAV20A0A0B4J274 112 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 NPIPB6E9PJ23 425 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 IGLV2-11P01706 119 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 ZNF414Q96IQ9 312 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 CREBBPQ92793 2442 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 MAST4O15021 2626 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 IGHV4-61A0A0C4DH41 118 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 OR2J3O76001 311 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 SLC25A16P16260 332 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 CIARTQ8N365 385 aaPredicted RBP16.84■□□□□ 0.29
TRIM54-202ENST00000380075 ARL6IP6Q8N6S5 226 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 MAPK1IP1LQ8NDC0 245 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 NOL4LQ96MY1 436 aaPredicted RBP16.84■□□□□ 0.29
TRIM54-202ENST00000380075 FBXL7Q9UJT9 491 aa16.84■□□□□ 0.29
TRIM54-202ENST00000380075 SERTM2A0A1B0GWG4 89 aa16.83■□□□□ 0.28
TRIM54-202ENST00000380075 C9orf152Q5JTZ5 239 aa16.83■□□□□ 0.28
TRIM54-202ENST00000380075 FAM120AOSQ5T036 256 aa16.83■□□□□ 0.28
TRIM54-202ENST00000380075 S4R3C0 116 aa16.83■□□□□ 0.28
TRIM54-202ENST00000380075 A0A096LNT2 108 aa16.82■□□□□ 0.28
TRIM54-202ENST00000380075 A0A1B0GXF2 115 aa16.82■□□□□ 0.28
TRIM54-202ENST00000380075 RPL7P18124 248 aaKnown RBP16.82■□□□□ 0.28
TRIM54-202ENST00000380075 SRIP30626 198 aa16.82■□□□□ 0.28
TRIM54-202ENST00000380075 DEFA6Q01524 100 aa16.82■□□□□ 0.28
TRIM54-202ENST00000380075 LINC00322Q6ZN03 302 aaPredicted RBP16.82■□□□□ 0.28
TRIM54-202ENST00000380075 SAMD10Q9BYL1 202 aa16.82■□□□□ 0.28
TRIM54-202ENST00000380075 AAMDCQ9H7C9 122 aa16.82■□□□□ 0.28
TRIM54-202ENST00000380075 CENPVL3A0A0U1RRI6 287 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 ZNF253O75346 499 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 DDTP30046 118 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 PSG9Q00887 426 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 PAX8Q06710 450 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 KIAA1644Q3SXP7 199 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 PRNTQ86SH4 94 aa16.81■□□□□ 0.28
TRIM54-202ENST00000380075 SCGB1D1O95968 90 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 CTSGP08311 255 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 UNQ5815/PRO19632Q6UWF5 114 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 KCNS1Q96KK3 526 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 C17orf77Q96MU5 243 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 HSPB9Q9BQS6 159 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 NAGKQ9UJ70 344 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 HBBP68871 147 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 SLAQ13239 276 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 PSG3Q16557 428 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 C16orf54Q6UWD8 224 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 ZNF664Q8N3J9 261 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 TMUB1Q9BVT8 246 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 RABAC1Q9UI14 185 aa16.8■□□□□ 0.28
TRIM54-202ENST00000380075 TRAV8-1A0A0A6YYK1 113 aa16.79■□□□□ 0.28
TRIM54-202ENST00000380075 OR2T8A6NH00 312 aa16.79■□□□□ 0.28
TRIM54-202ENST00000380075 DIRC3C9JPN6 131 aa16.79■□□□□ 0.28
TRIM54-202ENST00000380075 RBPMS2Q6ZRY4 209 aaKnown RBP16.79■□□□□ 0.28
TRIM54-202ENST00000380075 SIGLECL1Q8N7X8 197 aa16.79■□□□□ 0.28
TRIM54-202ENST00000380075 F2Z2F3 143 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 PIP4P2Q8N4L2 257 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 ZNF502Q8TBZ5 544 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 PRO1933Q9H354 126 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 PSG8Q9UQ74 426 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 FLNAP21333 2647 aaKnown RBP16.78■□□□□ 0.28
TRIM54-202ENST00000380075 FBLL1A6NHQ2 334 aaKnown RBP16.78■□□□□ 0.28
TRIM54-202ENST00000380075 SMAD7O15105 426 aaKnown RBP16.78■□□□□ 0.28
TRIM54-202ENST00000380075 ATP6V0E1O15342 81 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 CSN1S1P47710 185 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 LOXL1Q08397 574 aaPredicted RBP16.78■□□□□ 0.28
TRIM54-202ENST00000380075 KLF5Q13887 457 aaPredicted RBP16.78■□□□□ 0.28
TRIM54-202ENST00000380075 Q6ZWC4 215 aa16.78■□□□□ 0.28
TRIM54-202ENST00000380075 GPX1P07203 203 aa16.77■□□□□ 0.28
TRIM54-202ENST00000380075 RAB9AP51151 201 aa16.77■□□□□ 0.28
TRIM54-202ENST00000380075 GDF5OSQ5U4N7 250 aa16.77■□□□□ 0.28
TRIM54-202ENST00000380075 TCF24Q7RTU0 167 aa16.77■□□□□ 0.28
TRIM54-202ENST00000380075 ECSCRQ19T08 205 aa16.77■□□□□ 0.27
TRIM54-202ENST00000380075 GTSF1Q8WW33 167 aa16.77■□□□□ 0.27
TRIM54-202ENST00000380075 ZANQ9Y493 2812 aa16.76■□□□□ 0.27
TRIM54-202ENST00000380075 IGHV3-23P01764 117 aa16.76■□□□□ 0.27
TRIM54-202ENST00000380075 FOXA3P55318 350 aaPredicted RBP16.76■□□□□ 0.27
TRIM54-202ENST00000380075 C15orf32Q32M92 178 aa16.76■□□□□ 0.27
TRIM54-202ENST00000380075 C5orf56Q8N8D9 126 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms