RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
CSNK1A1-202ENST00000377843 PPP1R35Q8TAP8 253 aa12.44□□□□□ -0.42
CSNK1A1-202ENST00000377843 MRPL20Q9BYC9 149 aaKnown RBP12.44□□□□□ -0.42
CSNK1A1-202ENST00000377843 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
CSNK1A1-202ENST00000377843 HOXB4P17483 251 aaPredicted RBP12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 DEFB127Q9H1M4 99 aa12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 PRRG2O14669 202 aa12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 ZNF562Q6V9R5 426 aa12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 ZNF493Q6ZR52 646 aa12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 CEND1Q8N111 149 aa12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
CSNK1A1-202ENST00000377843 KIR2DL2P43627 348 aaPredicted RBP12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 TMEM164Q5U3C3 297 aa12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 SPRR3Q9UBC9 169 aa12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 HEATR1Q9H583 2144 aaKnown RBP12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 CECR9P0C854 216 aa12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 PPIFP30405 207 aaKnown RBP12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 MRPL51Q4U2R6 128 aaKnown RBP12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 MOGAT3Q86VF5 341 aa12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 ZNF318Q5VUA4 2279 aa12.42□□□□□ -0.42
CSNK1A1-202ENST00000377843 NPYP01303 97 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 IGKV3-15P01624 115 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 CT45A10P0DMU9 189 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 INS-IGF2F8WCM5 200 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 OTORQ9NRC9 128 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
CSNK1A1-202ENST00000377843 TMSB15BA0A087X1C1 80 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 FHL3Q13643 280 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 ODF1Q14990 250 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 HCP5Q6MZN7 132 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 LYZL1Q6UWQ5 148 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 ORMDL3Q8N138 153 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 RITA1Q96K30 269 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 C17orf77Q96MU5 243 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 LINC00312Q9Y6C7 94 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 DSCAMO60469 2012 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 MEOX1P50221 254 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 PIFOQ8TCI5 191 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 ZMAT4Q9H898 229 aa12.4□□□□□ -0.42
CSNK1A1-202ENST00000377843 APELAP0DMC3 54 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 ZNF71Q9NQZ8 489 aaPredicted RBP12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 MGAQ8IWI9 3026 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 A0A1B0GW15 77 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 A0A1W2PPI3 338 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 NPIPB5A8MRT5 1133 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 C12orf74Q32Q52 190 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 C8orf86Q6ZUL3 223 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 OSR1Q8TAX0 266 aaPredicted RBP12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 AKAP13Q12802 2813 aa12.39□□□□□ -0.43
CSNK1A1-202ENST00000377843 CEP250Q9BV73 2442 aa12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 MT-ATP8P03928 68 aa12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 C8orf49Q96NF6 230 aa12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 RPUSD1Q9UJJ7 312 aaKnown RBP12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 DSCAML1Q8TD84 2053 aa12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 CRYGCP07315 174 aa12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
CSNK1A1-202ENST00000377843 LHBP01229 141 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 MBNL2Q5VZF2 373 aaKnown RBP12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 ZNF833PQ6ZTB9 187 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 C8orf46Q8TAG6 207 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 TMEM167AQ8TBQ9 72 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 ZNF502Q8TBZ5 544 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 TRGV9Q99603 122 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 SMG1Q96Q15 3661 aaKnown RBP12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 TSPAN13O95857 204 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 FAM216BQ8N7L0 139 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 SYT8Q8NBV8 401 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 PSG8Q9UQ74 426 aa12.37□□□□□ -0.43
CSNK1A1-202ENST00000377843 SUB1P53999 127 aaKnown RBP eCLIP12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 LCNL1Q6ZST4 164 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 ZNF418Q8TF45 676 aaPredicted RBP12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 A0A1B0GWB2 263 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 IGLV2-23P01705 113 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 SPINK8P0C7L1 97 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 DEFB124Q8NES8 71 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 RNF183Q96D59 192 aa12.36□□□□□ -0.43
CSNK1A1-202ENST00000377843 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 LYZP61626 148 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 NFE4Q86UQ8 179 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 TTC9CQ8N5M4 171 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 CCL13Q99616 98 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 TRBV6-1A0A0K0K1D8 114 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms