RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 HIGD1AQ9Y241 93 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 SMAD5-AS1Q9Y6J3 95 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 PGPA6NDG6 321 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 CCL21O00585 134 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 NDUFB8O95169 186 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 PAX8Q06710 450 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 C5orf64Q2M2E5 130 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 TOMM20LQ6UXN7 152 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 NRN1Q9NPD7 142 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 SPINK4O60575 86 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 APCSP02743 223 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 HIST1H1EP10412 219 aaKnown RBP7.49□□□□□ -1.21
TRIM39-202ENST00000376659 MGST1P10620 155 aaKnown RBP7.49□□□□□ -1.21
TRIM39-202ENST00000376659 UNQ5815/PRO19632Q6UWF5 114 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 EXOC3-AS1Q8N2X6 119 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 TXN2Q99757 166 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 J3KRW8 73 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 HAX1O00165 279 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 GNG7O60262 68 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 EBLN2Q6P2I7 272 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 VMO1Q7Z5L0 202 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 OR2D3Q8NGH3 330 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 RPEQ96AT9 228 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 DPM3Q9P2X0 92 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 CUBNO60494 3623 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 TRAV8-1A0A0A6YYK1 113 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 ODF1Q14990 250 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 TCF24Q7RTU0 167 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 ERASQ7Z444 233 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 BLNKQ8WV28 456 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 ONECUT1Q9UBC0 465 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 MED13LQ71F56 2210 aa7.49□□□□□ -1.21
TRIM39-202ENST00000376659 FBN2P35556 2912 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 C3orf79P0CE67 100 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 HTR1DP28221 377 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 PRSS57Q6UWY2 283 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 LYPD1Q8N2G4 141 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 VN1R17PQ8TDU5 208 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 NEU4Q8WWR8 484 aaPredicted RBP7.48□□□□□ -1.21
TRIM39-202ENST00000376659 IGHV7-81A0A0B4J1V7 117 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 H3BTX0 84 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 SLC25A5P05141 298 aaKnown RBP7.48□□□□□ -1.21
TRIM39-202ENST00000376659 UCNP55089 124 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 ZNF562Q6V9R5 426 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 Q8N9W7 124 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
TRIM39-202ENST00000376659 PRORYQ9H606 182 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 SOX21Q9Y651 276 aaPredicted RBP7.48□□□□□ -1.21
TRIM39-202ENST00000376659 ACACAQ13085 2346 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 CFAP46Q8IYW2 2715 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 A0A1B0GV72 72 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 DIRC3C9JPN6 131 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 CIARTQ8N365 385 aaPredicted RBP7.48□□□□□ -1.21
TRIM39-202ENST00000376659 SGK494Q96LW2 274 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 ZFAND3Q9H8U3 227 aa7.48□□□□□ -1.21
TRIM39-202ENST00000376659 SAMD13Q5VXD3 122 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 SPTBN1Q01082 2364 aaKnown RBP7.47□□□□□ -1.21
TRIM39-202ENST00000376659 AKAP6Q13023 2319 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 CLPSL1A2RUU4 121 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 OOSP1A8MZH6 123 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 RNF125Q96EQ8 232 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 FAM103A1Q9BTL3 118 aaKnown RBP7.47□□□□□ -1.21
TRIM39-202ENST00000376659 U3KQK5 164 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 ANKHD1Q8IWZ3 2542 aaKnown RBP7.47□□□□□ -1.21
TRIM39-202ENST00000376659 FAM181BA6NEQ2 426 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 CD24P25063 80 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 ARF6P62330 175 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 PSG3Q16557 428 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 KLF17Q5JT82 389 aaPredicted RBP7.47□□□□□ -1.21
TRIM39-202ENST00000376659 VAMP8Q9BV40 100 aa7.47□□□□□ -1.21
TRIM39-202ENST00000376659 IGHV2-70DA0A0C4DH43 119 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 HLA-DRB1P01911 266 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 CTSGP08311 255 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 GPR6P46095 362 aaPredicted RBP7.46□□□□□ -1.21
TRIM39-202ENST00000376659 LYZP61626 148 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 LMO4P61968 165 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 HBBP68871 147 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 PDE6HQ13956 83 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 MINOS1Q5TGZ0 78 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 ZNF493Q6ZR52 646 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 RASL11BQ9BPW5 248 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 COX11Q9Y6N1 276 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 MINOS1-NBL1R4GNA1 71 aa7.46□□□□□ -1.21
TRIM39-202ENST00000376659 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.22
TRIM39-202ENST00000376659 RAB1BQ9H0U4 201 aa7.46□□□□□ -1.22
TRIM39-202ENST00000376659 UTP20O75691 2785 aaKnown RBP7.46□□□□□ -1.22
TRIM39-202ENST00000376659 SH2D7A6NKC9 451 aaPredicted RBP7.45□□□□□ -1.22
TRIM39-202ENST00000376659 NDUFS7O75251 213 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 HINT1P49773 126 aaPredicted RBP7.45□□□□□ -1.22
TRIM39-202ENST00000376659 PRR31Q5SQ13 230 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 RBPMS2Q6ZRY4 209 aaKnown RBP7.45□□□□□ -1.22
TRIM39-202ENST00000376659 CHRDL1Q9BU40 450 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 HILPDAQ9Y5L2 63 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 A0A096LNJ9 63 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 IGHV1-24A0A0C4DH33 117 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 C19orf84I3L1E1 186 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 CRIP2P52943 208 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms