RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 K7EM74 188 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 PRDM6Q9NQX0 595 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 RPL36AP83881 106 aaKnown RBP8.3□□□□□ -1.08
PTCH1-204ENST00000375290 RPL36ALQ969Q0 106 aaKnown RBP8.3□□□□□ -1.08
PTCH1-204ENST00000375290 NPSP0C0P6 89 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 IGLL1P15814 213 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 LEAP2Q969E1 77 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 SCRT1Q9BWW7 348 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 IGKV3-7A0A075B6H7 116 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 PRSS47A8MTI9 375 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 LTAP01374 205 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 NPIPB5A8MRT5 1133 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 MRPL53Q96EL3 112 aaKnown RBP8.3□□□□□ -1.08
PTCH1-204ENST00000375290 C9JQL5 133 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 TMEM155Q4W5P6 130 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 ZNF415Q09FC8 603 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 GATA2P23769 480 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-204ENST00000375290 PAX9P55771 341 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 CDKN1AP38936 164 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 NPYP01303 97 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 KLRD1Q13241 179 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 ABCA1O95477 2261 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 PLXNB3Q9ULL4 1909 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 TRAV13-2A0A0B4J235 113 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 LINC00473A8K010 186 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 SPXQ9BT56 116 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 C5orf64Q2M2E5 130 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 WFDC3Q8IUB2 231 aa8.29□□□□□ -1.08
PTCH1-204ENST00000375290 IGHV1-3A0A0C4DH29 117 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 CDCP2Q5VXM1 449 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 JMJD8Q96S16 334 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 WNK2Q9Y3S1 2297 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 INS-IGF2F8WCM5 200 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 NTN3O00634 580 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-204ENST00000375290 SIGLEC9Q9Y336 463 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 E9PLN8 166 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 SPACA3Q8IXA5 215 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 RNF152Q8N8N0 203 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 RNASE6Q93091 150 aaKnown RBP8.28□□□□□ -1.08
PTCH1-204ENST00000375290 CLEC19AQ6UXS0 136 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 ZNF837Q96EG3 531 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-204ENST00000375290 H3BTX0 84 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 LCN12Q6JVE5 192 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 ZNF833PQ6ZTB9 187 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 ZNF114Q8NC26 417 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 PRADC1Q9BSG0 188 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 SDK2Q58EX2 2172 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 PSPNO60542 156 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 DAZ1Q9NQZ3 744 aaKnown RBP8.28□□□□□ -1.08
PTCH1-204ENST00000375290 THADAQ6YHU6 1953 aa8.28□□□□□ -1.08
PTCH1-204ENST00000375290 MYO7BQ6PIF6 2116 aa8.27□□□□□ -1.08
PTCH1-204ENST00000375290 TRACP01848 142 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 ABCA7Q8IZY2 2146 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 DOCK10Q96BY6 2186 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 C9JAW5 83 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 I3L3M4 83 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 C15orf32Q32M92 178 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 ALPK3Q96L96 1907 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 IGHV1-18A0A0C4DH31 117 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 BUB1B-PAK6H3BSN5 160 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 TMEM258P61165 79 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-204ENST00000375290 RHOHQ15669 191 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 DOPEY2Q9Y3R5 2298 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 GATA3P23771 443 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 CSRP1P21291 193 aaKnown RBP8.27□□□□□ -1.09
PTCH1-204ENST00000375290 TEN1Q86WV5 123 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 PLXND1Q9Y4D7 1925 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 FOXL2P58012 376 aa8.27□□□□□ -1.09
PTCH1-204ENST00000375290 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TCTEX1D4Q5JR98 221 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 MBD3L2Q8NHZ7 208 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TMEM131Q92545 1883 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 ADARB2-AS1A8MUL3 147 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 AZU1P20160 251 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 Q6ZRM9 215 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TRAV12-1A0A0B4J245 112 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 CTSBP07858 339 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 PRSS22Q9GZN4 317 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 EDA2RQ9HAV5 297 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 NCKAP5O14513 1909 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TRAV41A0A0B4J266 112 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 RNASE1P07998 156 aaKnown RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 YLPM1P49750 1951 aaKnown RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 PRTN3P24158 256 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 DCTN5Q9BTE1 182 aa8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TSSC4Q9Y5U2 329 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-204ENST00000375290 TMEM178BH3BS89 294 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms