RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 NUDT10Q8NFP7 164 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 NUDT11Q96G61 164 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 S4R3C0 116 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 MYO18BQ8IUG5 2567 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 A0A1B0GXF2 115 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 SH2D7A6NKC9 451 aaPredicted RBP9.68□□□□□ -0.86
PRPF4-202ENST00000374199 DNLZQ5SXM8 178 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 PPP1R14DQ9NXH3 145 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 ZFP30Q9Y2G7 519 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
PRPF4-202ENST00000374199 PSG3Q16557 428 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 EXOC3-AS1Q8N2X6 119 aa9.68□□□□□ -0.86
PRPF4-202ENST00000374199 MRPL53Q96EL3 112 aaKnown RBP9.68□□□□□ -0.86
PRPF4-202ENST00000374199 TRAV34A0A0B4J273 112 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 OR5R1Q8NH85 324 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 TSKUQ8WUA8 353 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 RBAKDNA6NC62 111 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 GPR183P32249 361 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 RELQ04864 619 aaPredicted RBP9.67□□□□□ -0.86
PRPF4-202ENST00000374199 ATP5G2Q06055 141 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 A1L4Q6 167 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 PSMB8P28062 276 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 DEFB112Q30KQ8 113 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 Q6ZS46 218 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 ZNF575Q86XF7 245 aa9.67□□□□□ -0.86
PRPF4-202ENST00000374199 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
PRPF4-202ENST00000374199 APOHP02749 345 aaPredicted RBP9.66□□□□□ -0.86
PRPF4-202ENST00000374199 HNF1AP20823 631 aa9.66□□□□□ -0.86
PRPF4-202ENST00000374199 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
PRPF4-202ENST00000374199 Q5PR19 223 aa9.66□□□□□ -0.86
PRPF4-202ENST00000374199 ATP5L2Q7Z4Y8 100 aa9.66□□□□□ -0.86
PRPF4-202ENST00000374199 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
PRPF4-202ENST00000374199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.66□□□□□ -0.86
PRPF4-202ENST00000374199 OR4B1Q8NGF8 309 aa9.66□□□□□ -0.86
PRPF4-202ENST00000374199 NDUFA4O00483 81 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 MT-ND6P03923 174 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 BLCAPP62952 87 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
PRPF4-202ENST00000374199 ZFYVE26Q68DK2 2539 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 UBE2G1P62253 170 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 GLMPQ8WWB7 406 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 TP53TG3Q9ULZ0 132 aa9.65□□□□□ -0.86
PRPF4-202ENST00000374199 RNF223E7ERA6 249 aa9.65□□□□□ -0.87
PRPF4-202ENST00000374199 Q71RC1 249 aaPredicted RBP9.65□□□□□ -0.87
PRPF4-202ENST00000374199 RPP21Q9H633 154 aaKnown RBP9.65□□□□□ -0.87
PRPF4-202ENST00000374199 ANKRD17O75179 2603 aaKnown RBP9.65□□□□□ -0.87
PRPF4-202ENST00000374199 SOCS3O14543 225 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 CRIP1P50238 77 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 LINC00310P59036 64 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 Q0VG73 95 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 CLEC19AQ6UXS0 136 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 COL8A1P27658 744 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 C9orf152Q5JTZ5 239 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 OR8I2Q8N0Y5 310 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
PRPF4-202ENST00000374199 H3BTX0 84 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 IGHV4-59P01825 116 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 NDUFA6P56556 154 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 NHLRC2Q8NBF2 726 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 ZC2HC1AQ96GY0 325 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 TRAPPC1Q9Y5R8 145 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 WNK2Q9Y3S1 2297 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 GPHB5Q86YW7 130 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
PRPF4-202ENST00000374199 TRGV3P03979 118 aa9.62□□□□□ -0.87
PRPF4-202ENST00000374199 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
PRPF4-202ENST00000374199 HIST1H2BLQ99880 126 aa9.62□□□□□ -0.87
PRPF4-202ENST00000374199 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
PRPF4-202ENST00000374199 ZNF705GA8MUZ8 300 aaPredicted RBP9.62□□□□□ -0.87
PRPF4-202ENST00000374199 GATCO43716 136 aaKnown RBP9.62□□□□□ -0.87
PRPF4-202ENST00000374199 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
PRPF4-202ENST00000374199 NOL4LQ96MY1 436 aaPredicted RBP9.62□□□□□ -0.87
PRPF4-202ENST00000374199 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
PRPF4-202ENST00000374199 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 TGFAP01135 160 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
PRPF4-202ENST00000374199 MGST1P10620 155 aaKnown RBP9.61□□□□□ -0.87
PRPF4-202ENST00000374199 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 CMTM2Q8TAZ6 248 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 NEU1Q99519 415 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 CLEC5AQ9NY25 188 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 K7EMT4 169 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 AKAP6Q13023 2319 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 LY6EQ16553 131 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 CYB5R2Q6BCY4 276 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms