RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 IGLL1P15814 213 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 CTHRC1Q96CG8 243 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 C1orf159Q96HA4 380 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 A0A1B0GUS0 222 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 IGHG2P01859 326 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 Q6ZT83 130 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 PPP1R32Q7Z5V6 425 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 MGAMO43451 1857 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 ANAPC1Q9H1A4 1944 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 CCL25O15444 150 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 SUPT4H1P63272 117 aaKnown RBP12.59□□□□□ -0.39
COL5A1-201ENST00000371817 TAL2Q16559 108 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 FAM166AQ6J272 317 aa12.59□□□□□ -0.39
COL5A1-201ENST00000371817 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.39
COL5A1-201ENST00000371817 NBL1P41271 181 aa12.58□□□□□ -0.39
COL5A1-201ENST00000371817 SPG11Q96JI7 2443 aa12.58□□□□□ -0.39
COL5A1-201ENST00000371817 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 PRR31Q5SQ13 230 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 TRGV9Q99603 122 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 DEFB124Q8NES8 71 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 RCHY1Q96PM5 261 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 LYL1P12980 280 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 DENND4CQ5VZ89 1909 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 C14orf178Q8N769 122 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-201ENST00000371817 ZNF501Q96CX3 271 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-201ENST00000371817 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 KLRD1Q13241 179 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 MRPL55Q7Z7F7 128 aaKnown RBP12.58□□□□□ -0.4
COL5A1-201ENST00000371817 LYPD1Q8N2G4 141 aa12.58□□□□□ -0.4
COL5A1-201ENST00000371817 TRAV13-2A0A0B4J235 113 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 A0A1W2PPI3 338 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 CELA2AP08217 269 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 SLC25A16P16260 332 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 LIME1Q9H400 295 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 SRRM4A7MD48 611 aaKnown RBP12.57□□□□□ -0.4
COL5A1-201ENST00000371817 MESP1Q9BRJ9 268 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 PAX8Q06710 450 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 SS18Q15532 418 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 DEFB104AQ8WTQ1 72 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 LGALS9BQ3B8N2 356 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 LGALS9CQ6DKI2 356 aa12.57□□□□□ -0.4
COL5A1-201ENST00000371817 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 SPATA31B1PQ5VZV4 182 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 TEX48A0A1B0GUV7 120 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 J3QRE1 110 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 PRRC2AP48634 2157 aaKnown RBP12.56□□□□□ -0.4
COL5A1-201ENST00000371817 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 C1orf210Q8IVY1 113 aa12.56□□□□□ -0.4
COL5A1-201ENST00000371817 AMTNQ6UX39 209 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 A0A0A6YYD4 124 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 CLPSL1A2RUU4 121 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 LILRA1O75019 489 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-201ENST00000371817 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 SPATA25Q9BR10 227 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 A0A1B0GX51 115 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 RPL15P61313 204 aaKnown RBP12.55□□□□□ -0.4
COL5A1-201ENST00000371817 TMEM14EPQ6UXP3 125 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 CRLF1O75462 422 aa12.55□□□□□ -0.4
COL5A1-201ENST00000371817 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 CDCP2Q5VXM1 449 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 A0A0G2JMZ2 1700 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 LRRC37A2A6NM11 1700 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 LTBP4Q8N2S1 1624 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 LILRA6Q6PI73 481 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 CCL19Q99731 98 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 V9GYY9 64 aa12.54□□□□□ -0.4
COL5A1-201ENST00000371817 CFHR2P36980 270 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 F6UB75 175 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 RS1O15537 224 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 NPYP01303 97 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 RSPO4Q2I0M5 234 aaPredicted RBP12.53□□□□□ -0.4
COL5A1-201ENST00000371817 ALPK3Q96L96 1907 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 ATP5J2P56134 94 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 TINCRA0A1B0GVN0 87 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 OTOGLQ3ZCN5 2332 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 RPP25Q9BUL9 199 aaKnown RBP12.53□□□□□ -0.4
COL5A1-201ENST00000371817 FAM104BQ5XKR9 115 aa12.53□□□□□ -0.4
COL5A1-201ENST00000371817 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.4
COL5A1-201ENST00000371817 ZNF329Q86UD4 541 aa12.52□□□□□ -0.4
COL5A1-201ENST00000371817 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.41
COL5A1-201ENST00000371817 PAQR4Q8N4S7 273 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-201ENST00000371817 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.41
COL5A1-201ENST00000371817 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.41
COL5A1-201ENST00000371817 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.41
COL5A1-201ENST00000371817 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
COL5A1-201ENST00000371817 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms