RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 NTF3P20783 257 aa22.63■■□□□ 1.21
SSBP3-204ENST00000371320 C16orf54Q6UWD8 224 aa22.63■■□□□ 1.21
SSBP3-204ENST00000371320 LPAR2Q9HBW0 351 aa22.63■■□□□ 1.21
SSBP3-204ENST00000371320 MED13LQ71F56 2210 aa22.63■■□□□ 1.21
SSBP3-204ENST00000371320 CTSGP08311 255 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 PRB4P10163 310 aaPredicted RBP22.62■■□□□ 1.21
SSBP3-204ENST00000371320 NIT1Q86X76 327 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 ZNF785A8K8V0 405 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 PRR31Q5SQ13 230 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 TXN2Q99757 166 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 ASCL2Q99929 193 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 VAMP8Q9BV40 100 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 TMUB1Q9BVT8 246 aa22.62■■□□□ 1.21
SSBP3-204ENST00000371320 LBHQ53QV2 105 aaPredicted RBP22.61■■□□□ 1.21
SSBP3-204ENST00000371320 ZMAT5Q9UDW3 170 aaKnown RBP22.61■■□□□ 1.21
SSBP3-204ENST00000371320 HSBP1O75506 76 aa22.6■■□□□ 1.21
SSBP3-204ENST00000371320 Q8N976 141 aa22.6■■□□□ 1.21
SSBP3-204ENST00000371320 RPL7P18124 248 aaKnown RBP22.59■■□□□ 1.21
SSBP3-204ENST00000371320 UNQ5815/PRO19632Q6UWF5 114 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 FAM110DQ8TAY7 271 aaPredicted RBP22.59■■□□□ 1.21
SSBP3-204ENST00000371320 BORCS7Q96B45 105 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 C20orf144Q9BQM9 153 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 PAM16Q9Y3D7 125 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 CACNA1AO00555 2505 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 CSN1S1P47710 185 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 PSG9Q00887 426 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 RABAC1Q9UI14 185 aa22.59■■□□□ 1.21
SSBP3-204ENST00000371320 OVOL3O00110 214 aa22.58■■□□□ 1.21
SSBP3-204ENST00000371320 ECSCRQ19T08 205 aa22.58■■□□□ 1.21
SSBP3-204ENST00000371320 RNASEKQ6P5S7 137 aaKnown RBP22.58■■□□□ 1.21
SSBP3-204ENST00000371320 C2orf88Q9BSF0 95 aa22.58■■□□□ 1.21
SSBP3-204ENST00000371320 CHEK1O14757 476 aa22.58■■□□□ 1.2
SSBP3-204ENST00000371320 FOXA3P55318 350 aaPredicted RBP22.58■■□□□ 1.2
SSBP3-204ENST00000371320 HAX1O00165 279 aa22.57■■□□□ 1.2
SSBP3-204ENST00000371320 NPFFO15130 113 aa22.57■■□□□ 1.2
SSBP3-204ENST00000371320 C3orf79P0CE67 100 aa22.57■■□□□ 1.2
SSBP3-204ENST00000371320 ASH1LQ9NR48 2969 aaKnown RBP22.57■■□□□ 1.2
SSBP3-204ENST00000371320 A0A1B0GV90 55 aa22.56■■□□□ 1.2
SSBP3-204ENST00000371320 ATP6V0E1O15342 81 aa22.56■■□□□ 1.2
SSBP3-204ENST00000371320 C15orf32Q32M92 178 aa22.56■■□□□ 1.2
SSBP3-204ENST00000371320 CSMD1Q96PZ7 3565 aa22.55■■□□□ 1.2
SSBP3-204ENST00000371320 SERTM2A0A1B0GWG4 89 aa22.55■■□□□ 1.2
SSBP3-204ENST00000371320 APOHP02749 345 aaPredicted RBP22.55■■□□□ 1.2
SSBP3-204ENST00000371320 CRIP1P50238 77 aa22.55■■□□□ 1.2
SSBP3-204ENST00000371320 PIP4P2Q8N4L2 257 aa22.55■■□□□ 1.2
SSBP3-204ENST00000371320 SH2D7A6NKC9 451 aaPredicted RBP22.54■■□□□ 1.2
SSBP3-204ENST00000371320 M0R2Z0 102 aa22.54■■□□□ 1.2
SSBP3-204ENST00000371320 IGHV4-39P01824 125 aa22.54■■□□□ 1.2
SSBP3-204ENST00000371320 CT45A10P0DMU9 189 aa22.54■■□□□ 1.2
SSBP3-204ENST00000371320 RHOGP84095 191 aa22.54■■□□□ 1.2
SSBP3-204ENST00000371320 ZNF502Q8TBZ5 544 aa22.54■■□□□ 1.2
SSBP3-204ENST00000371320 IGHV3-35A0A0C4DH35 117 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 CENPVL3A0A0U1RRI6 287 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 S100A7P31151 101 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 GPR183P32249 361 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 FAM162BQ5T6X4 162 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 C8orf49Q96NF6 230 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 A0A1B0GUT8 65 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 MIEN1Q9BRT3 115 aa22.53■■□□□ 1.2
SSBP3-204ENST00000371320 LOC102724200A0A096LPH7 203 aaPredicted RBP22.52■■□□□ 1.2
SSBP3-204ENST00000371320 EREGO14944 169 aa22.52■■□□□ 1.2
SSBP3-204ENST00000371320 ZNF705AQ6ZN79 300 aaPredicted RBP22.52■■□□□ 1.2
SSBP3-204ENST00000371320 AKAP6Q13023 2319 aa22.52■■□□□ 1.19
SSBP3-204ENST00000371320 IGHV3OR16-8A0A075B7F1 116 aa22.51■■□□□ 1.19
SSBP3-204ENST00000371320 KLK9Q2XQG4 91 aa22.51■■□□□ 1.19
SSBP3-204ENST00000371320 KLK9Q9UKQ9 250 aa22.51■■□□□ 1.19
SSBP3-204ENST00000371320 SMAD5-AS1Q9Y6J3 95 aa22.51■■□□□ 1.19
SSBP3-204ENST00000371320 LINC00469Q8N7U9 141 aa22.51■■□□□ 1.19
SSBP3-204ENST00000371320 FAM181BA6NEQ2 426 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 CLEC3BP05452 202 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 RIGQ13278 110 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 ARL6IP6Q8N6S5 226 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 URB1-AS1Q96HZ7 61 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 NDFIP1Q9BT67 221 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 IGKV2-40A0A087WW87 121 aaPredicted RBP22.5■■□□□ 1.19
SSBP3-204ENST00000371320 IGKV2D-40P01614 121 aaPredicted RBP22.5■■□□□ 1.19
SSBP3-204ENST00000371320 ARMS2P0C7Q2 107 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 SNHG12Q9BXW3 62 aa22.5■■□□□ 1.19
SSBP3-204ENST00000371320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.49■■□□□ 1.19
SSBP3-204ENST00000371320 LINC01548A6NM66 108 aa22.49■■□□□ 1.19
SSBP3-204ENST00000371320 G3V318 75 aa22.48■■□□□ 1.19
SSBP3-204ENST00000371320 M0R143 59 aa22.48■■□□□ 1.19
SSBP3-204ENST00000371320 M0QZ24 198 aa22.47■■□□□ 1.19
SSBP3-204ENST00000371320 Q6AWC8 147 aa22.47■■□□□ 1.19
SSBP3-204ENST00000371320 SAPCD1Q5SSQ6 148 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 C5orf56Q8N8D9 126 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 TPPP3Q9BW30 176 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 RELQ04864 619 aaPredicted RBP22.46■■□□□ 1.19
SSBP3-204ENST00000371320 PAX8Q06710 450 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 EBLN2Q6P2I7 272 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 CHCHD1Q96BP2 118 aaKnown RBP22.46■■□□□ 1.19
SSBP3-204ENST00000371320 ZFAND3Q9H8U3 227 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 SVEP1Q4LDE5 3571 aa22.46■■□□□ 1.19
SSBP3-204ENST00000371320 A0A1B0GW15 77 aa22.45■■□□□ 1.18
SSBP3-204ENST00000371320 GOSR1O95249 250 aa22.45■■□□□ 1.18
SSBP3-204ENST00000371320 RAB4AP20338 218 aa22.45■■□□□ 1.18
SSBP3-204ENST00000371320 SPATA45Q537H7 98 aa22.45■■□□□ 1.18
SSBP3-204ENST00000371320 IGFL4Q6B9Z1 124 aa22.45■■□□□ 1.18
SSBP3-204ENST00000371320 IGHV3OR16-10A0A075B7F0 116 aa22.45■■□□□ 1.18
SSBP3-204ENST00000371320 FBLL1A6NHQ2 334 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms