RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SMAD7O15105 426 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 IGLC1P0CG04 106 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 DLX1P56177 255 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 FBLN7Q53RD9 439 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 C9orf139Q6ZV77 190 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 EXOC3-AS1Q8N2X6 119 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 NPBQ8NG41 125 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 OR8A1Q8NGG7 326 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 RAX2Q96IS3 184 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 LOC389332A0A1B0GUA5 103 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 OR4C46A6NHA9 309 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 ATP6V0E1O15342 81 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 TYMSP04818 313 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 ASIPP42127 132 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 EIF4EBP1Q13541 118 aaPredicted RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 PET117Q6UWS5 81 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 C22orf34Q6ZV56 151 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 MRPL52Q86TS9 123 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 TTC9CQ8N5M4 171 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 DUX5Q96PT3 197 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 SLC25A2Q9BXI2 301 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 CACNA1AO00555 2505 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 F2Z2F3 143 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 PROP1O75360 226 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 HOXB4P17483 251 aaPredicted RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 PSG3Q16557 428 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM97Q5BJF2 176 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 JMJD8Q96S16 334 aa4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 FNDC4Q9H6D8 234 aaPredicted RBP4.24□□□□□ -1.73
SMNDC1-202ENST00000369603 IGF2RP11717 2491 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 KMT2EQ8IZD2 1858 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 TRAV9-2A0A087WT02 112 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM231BA6NCW3 169 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 PPBPP02775 128 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 CT83Q5H943 113 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 LDLRAD2Q5SZI1 272 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 LCN12Q6JVE5 192 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 Q6ZWC4 215 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 NIT1Q86X76 327 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 PRELID3AQ96N28 172 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF492Q9P255 531 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 LINC00527Q9UJ94 153 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 CREBBPQ92793 2442 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 TRAV21A0A0B4J279 112 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 PSMB11A5LHX3 300 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 GGTLC3B5MD39 225 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 NDUFS7O75251 213 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 DUSP14O95147 198 aaKnown RBP4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 RPL15P61313 204 aaKnown RBP4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM231DQ6ZW35 169 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 GFRA4Q9GZZ7 299 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 CA1P00915 261 aaPredicted RBP4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 C3orf79P0CE67 100 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 BRWD1-AS2P59051 145 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 RUSC1-AS1Q66K80 236 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 Q86TA4 180 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM75Q8N9X5 138 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 YAE1D1Q9NRH1 226 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 SPG11Q96JI7 2443 aa4.23□□□□□ -1.73
SMNDC1-202ENST00000369603 H3BRN7 92 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 IGLV2-23P01705 113 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 HTN1P15515 57 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 HERVK_113P61574 105 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 CACNG7P62955 275 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 PSMG4Q5JS54 123 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 RAB37Q96AX2 223 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 PYGO2Q9BRQ0 406 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 SSBP4Q9BWG4 385 aaPredicted RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 NCOR2Q9Y618 2525 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 TRBV20OR9-2A0A075B6H5 130 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 H3BUA1 57 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 SNAI2O43623 268 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 LEPP41159 167 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 ZNF138P52744 262 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 SMAGPQ0VAQ4 97 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 GAGE1Q13065 139 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 FXYD5Q96DB9 178 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 LINC00477Q96M19 166 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 PEF1Q9UBV8 284 aaKnown RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 KIR2DL5BA0A0G2JN68 375 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 KIR2DL5BA0A0G2JPC4 375 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 IGHV4-39P01824 125 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 NMUP48645 174 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 PLP1P60201 277 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 UBE2V1Q13404 147 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 KIR2DL5AQ8N109 375 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 LY6G5BQ8NDX9 201 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 NUP35Q8NFH5 326 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 BEX4Q9NWD9 120 aaPredicted RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 IGKV2-40A0A087WW87 121 aaPredicted RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 IGKV2D-40P01614 121 aaPredicted RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 APOHP02749 345 aaPredicted RBP4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 Q5PR19 223 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 ORAOV1Q8WV07 137 aa4.22□□□□□ -1.73
SMNDC1-202ENST00000369603 DAZ1Q9NQZ3 744 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms