RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
BRCC3-204ENST00000369462 SAP30O75446 220 aa8.27□□□□□ -1.09
BRCC3-204ENST00000369462 RIPPLY3P57055 190 aa8.27□□□□□ -1.09
BRCC3-204ENST00000369462 HELTA6NFD8 242 aa8.27□□□□□ -1.09
BRCC3-204ENST00000369462 RANP62826 216 aaKnown RBP8.27□□□□□ -1.09
BRCC3-204ENST00000369462 HAGHQ16775 308 aa8.27□□□□□ -1.09
BRCC3-204ENST00000369462 PKD1L1Q8TDX9 2849 aa8.27□□□□□ -1.09
BRCC3-204ENST00000369462 SORL1Q92673 2214 aa8.27□□□□□ -1.09
BRCC3-204ENST00000369462 TRBV19A0A075B6N1 114 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 PAGE4O60829 102 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 GBGT1Q8N5D6 347 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 SUN5Q8TC36 379 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 DEFB114Q30KQ6 69 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 FAM90A2PQ658T7 463 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 SIGLEC8Q9NYZ4 499 aa8.26□□□□□ -1.09
BRCC3-204ENST00000369462 SLC17A3O00476 420 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 CD300EQ496F6 205 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-204ENST00000369462 CST9LP1Q5W188 147 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 NRN1Q9NPD7 142 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 YTHDF2Q9Y5A9 579 aaKnown RBP8.25□□□□□ -1.09
BRCC3-204ENST00000369462 NDUFB4O95168 129 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 CD33P20138 364 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 TFPI2P48307 235 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 GUK1Q16774 197 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 IGFL4Q6B9Z1 124 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 RBPMS2Q6ZRY4 209 aaKnown RBP8.25□□□□□ -1.09
BRCC3-204ENST00000369462 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 FAM210AQ96ND0 272 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 RARRES2Q99969 163 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 EIF5A2Q9GZV4 153 aaKnown RBP8.25□□□□□ -1.09
BRCC3-204ENST00000369462 ANK2Q01484 3957 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 A0A087X0K7 114 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 RBFOX3A6NFN3 312 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 FAM74A7A6NL05 159 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 IFNA1P01562 189 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 CD5P06127 495 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 PPT1P50897 306 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 PMS2P11Q13670 270 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 PDE6HQ13956 83 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 TOR2AQ5JU69 321 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 MS4A6AQ9H2W1 248 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 MANBALQ9NQG1 85 aa8.25□□□□□ -1.09
BRCC3-204ENST00000369462 A0A1W2PRE2 83 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 BCL2P10415 239 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 SUMO1P63165 101 aaKnown RBP8.24□□□□□ -1.09
BRCC3-204ENST00000369462 EXOC3-AS1Q8N2X6 119 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 LINC00862A6NCI5 91 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 DNASE2O00115 360 aaPredicted RBP8.24□□□□□ -1.09
BRCC3-204ENST00000369462 ATP5G3P48201 142 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 MEOX2P50222 304 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 WFDC9Q8NEX5 89 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 Q9H3A6 140 aa8.24□□□□□ -1.09
BRCC3-204ENST00000369462 ZNF331Q9NQX6 463 aaPredicted RBP8.24□□□□□ -1.09
BRCC3-204ENST00000369462 IZUMO1RA6ND01 250 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 PGPA6NDG6 321 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 GGTLC3B5MD39 225 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 PAFAH1B2P68402 229 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 SRSF3P84103 164 aaKnown RBP8.23□□□□□ -1.09
BRCC3-204ENST00000369462 RXFP4Q8TDU9 374 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 VAX2Q9UIW0 290 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 C11orf94C9JXX5 98 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 TSPAN4O14817 238 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 IGLV1-51P01701 117 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-204ENST00000369462 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-204ENST00000369462 ICAM4Q14773 271 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 COMMD7Q86VX2 200 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 DCANP1Q8TF63 244 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 MED9Q9NWA0 146 aa8.23□□□□□ -1.09
BRCC3-204ENST00000369462 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 HLA-DMBP28068 263 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 PSG9Q00887 426 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 RNF182Q8N6D2 247 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 AAMDCQ9H7C9 122 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 M0R3E3 92 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 ZNF253O75346 499 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 GUCA2BQ16661 112 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 ZNF506Q5JVG8 444 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 SLC7A5P1Q8MH63 180 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 LYPD1Q8N2G4 141 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 SLC50A1Q9BRV3 221 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 NKX6-2Q9C056 277 aaPredicted RBP8.22□□□□□ -1.09
BRCC3-204ENST00000369462 ARL2-SNX15V9GYD0 113 aa8.22□□□□□ -1.09
BRCC3-204ENST00000369462 TRAV8-2A0A0B4J237 113 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 RAB19A4D1S5 217 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 SOCS3O14543 225 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 IGLL1P15814 213 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 CD81P60033 236 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 OTORQ9NRC9 128 aa8.21□□□□□ -1.09
BRCC3-204ENST00000369462 K7EQG2 157 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 ISLRO14498 428 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
BRCC3-204ENST00000369462 TAGLN2P37802 199 aaKnown RBP8.21□□□□□ -1.1
BRCC3-204ENST00000369462 INSL3P51460 131 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 CCDC28AQ8IWP9 274 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 LINC00052Q96N35 136 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms