RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 RPH3ALQ9UNE2 315 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 INAFM1C9JVW0 142 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 SRD5A1P18405 259 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 RELQ04864 619 aaPredicted RBP10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 FOXE3Q13461 319 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 TEX38Q6PEX7 206 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 OCC1Q8TAD7 63 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 IGF2BP2-AS1Q96M15 143 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 C2CD3Q4AC94 2353 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 A0A0G2JLM5 398 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 PEX7O00628 323 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 UBE2CO00762 179 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 IGLV2-8P01709 118 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 HLA-DMBP28068 263 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 RNF212Q495C1 297 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 RNF152Q8N8N0 203 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 YPEL4Q96NS1 127 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 WNK1Q9H4A3 2382 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 M0R3E3 92 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 SLC25A5P05141 298 aaKnown RBP10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 ZNF124Q15973 351 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 CENPWQ5EE01 88 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 OR8I2Q8N0Y5 310 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 KLHDC1Q8N7A1 406 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 NHLRC2Q8NBF2 726 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 ASCL2Q99929 193 aa10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
HMGCS2-201ENST00000369406 TMEM89A2RUT3 159 aa10.77□□□□□ -0.68
HMGCS2-201ENST00000369406 ISLRO14498 428 aa10.77□□□□□ -0.68
HMGCS2-201ENST00000369406 OR4F17Q8NGA8 305 aa10.77□□□□□ -0.68
HMGCS2-201ENST00000369406 EPDR1Q9UM22 224 aa10.77□□□□□ -0.68
HMGCS2-201ENST00000369406 CLDN34H7C241 214 aa10.77□□□□□ -0.69
HMGCS2-201ENST00000369406 NDUFA4O00483 81 aa10.77□□□□□ -0.69
HMGCS2-201ENST00000369406 DEFB136Q30KP8 78 aa10.77□□□□□ -0.69
HMGCS2-201ENST00000369406 TM4SF20Q53R12 229 aa10.77□□□□□ -0.69
HMGCS2-201ENST00000369406 WIPF2Q8TF74 440 aaPredicted RBP10.77□□□□□ -0.69
HMGCS2-201ENST00000369406 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.69
HMGCS2-201ENST00000369406 TRAV8-1A0A0A6YYK1 113 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 HELTA6NFD8 242 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 COLCA2A8K830 154 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 RNASE1P07998 156 aaKnown RBP10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 ELANEP08246 267 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 SLC35B1P78383 322 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 PNRC1Q12796 327 aaPredicted RBP10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 OR5I1Q13606 314 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 METTL26Q96S19 204 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 OTORQ9NRC9 128 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 IGHV4OR15-8A0A075B7B6 117 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 A0A087WW49 117 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 HILS1P60008 231 aa10.76□□□□□ -0.69
HMGCS2-201ENST00000369406 ZNF320A2RRD8 509 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 GGCTO75223 188 aaKnown RBP10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 TCRAP04437 139 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 FOLR2P14207 255 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 FABP9Q0Z7S8 132 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 TCEAL7Q9BRU2 100 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 SMCO4Q9NRQ5 59 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 A0A087WWC5 75 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 C1orf196B1AJZ1 125 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 C9JCJ5 164 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 IGLV2-11P01706 119 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 LGALS1P09382 135 aaKnown RBP10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 CD99P14209 185 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 RPL7P18124 248 aaKnown RBP10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 C5orf17Q8NAS9 161 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 GLMPQ8WWB7 406 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 URGCP-MRPS24S4R325 110 aa10.75□□□□□ -0.69
HMGCS2-201ENST00000369406 GPHB5Q86YW7 130 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 C11orf44Q8N8P7 122 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 CDC42EP3Q9UKI2 254 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 GNG4P50150 75 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 C16orf54Q6UWD8 224 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 GOLT1AQ6ZVE7 132 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 FAM24BQ8N5W8 94 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 RNF182Q8N6D2 247 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 UBE2E2Q96LR5 201 aa10.74□□□□□ -0.69
HMGCS2-201ENST00000369406 JMJD1CQ15652 2540 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 TRAV8-2A0A0B4J237 113 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 A0A1B0GV90 55 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 CXCL1P09341 107 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 ATG101Q9BSB4 218 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 KLF12Q9Y4X4 402 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 VWFP04275 2813 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 B4DEV8 164 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 LINC01006Q8NI28 216 aa10.73□□□□□ -0.69
HMGCS2-201ENST00000369406 A0A087X0K7 114 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 CNN1P51911 297 aaKnown RBP10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 TMEM183BQ1AE95 376 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 ZNF331Q9NQX6 463 aaPredicted RBP10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 TGIF2-C20orf24A0A0A6YYL0 155 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 ZNF785A8K8V0 405 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 DEFA6Q01524 100 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms