RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GFRA4Q9GZZ7 299 aa9.39□□□□□ -0.91
COPA-202ENST00000368069 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
COPA-202ENST00000368069 ZFHX2Q9C0A1 2572 aaPredicted RBP9.39□□□□□ -0.91
COPA-202ENST00000368069 TRAV41A0A0B4J266 112 aa9.39□□□□□ -0.91
COPA-202ENST00000368069 A0A1W2PNU3 283 aaPredicted RBP9.39□□□□□ -0.91
COPA-202ENST00000368069 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
COPA-202ENST00000368069 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
COPA-202ENST00000368069 C5orf30Q96GV9 206 aa9.39□□□□□ -0.91
COPA-202ENST00000368069 PLCE1Q9P212 2302 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 SMIM27A0A1W2PRY6 76 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
COPA-202ENST00000368069 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.91
COPA-202ENST00000368069 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
COPA-202ENST00000368069 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 CREBBPQ92793 2442 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 SRSF8Q9BRL6 282 aaKnown RBP9.38□□□□□ -0.91
COPA-202ENST00000368069 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
COPA-202ENST00000368069 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
COPA-202ENST00000368069 EFNA4P52798 201 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 IGKCP01834 107 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 PRTN3P24158 256 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
COPA-202ENST00000368069 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
COPA-202ENST00000368069 A0A087X0K7 114 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 NDPQ00604 133 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 CD7P09564 240 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 GUSBP1Q15486 140 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 FXYD5Q96DB9 178 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 SPRY4Q9C004 299 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 ADAMTS9Q9P2N4 1935 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 SNCGO76070 127 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 CT83Q5H943 113 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 PIP4P1Q86T03 277 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
COPA-202ENST00000368069 SEC11AP67812 179 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 HSD52Q0P140 79 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
COPA-202ENST00000368069 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 SRD5A1P18405 259 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 PDE6HQ13956 83 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 LDLRAD2Q5SZI1 272 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 THAP8Q8NA92 274 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 DKK4Q9UBT3 224 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 LHBP01229 141 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 COX6CP09669 75 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 TMEM75Q8N9X5 138 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 RCHY1Q96PM5 261 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 JKAMPQ9P055 326 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 TECTAO75443 2155 aa9.36□□□□□ -0.91
COPA-202ENST00000368069 OVOL1O14753 267 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
COPA-202ENST00000368069 ZNF562Q6V9R5 426 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 NAA38Q9BRA0 125 aaKnown RBP9.35□□□□□ -0.91
COPA-202ENST00000368069 TMEM213A2RRL7 107 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 FAM231BA6NCW3 169 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 APOMO95445 188 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 C8orf49Q96NF6 230 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 NUP210LQ5VU65 1888 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 TGFAP01135 160 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 ERCC8Q13216 396 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 GEMIN7Q9H840 131 aaKnown RBP9.35□□□□□ -0.91
COPA-202ENST00000368069 ARHGAP21Q5T5U3 1957 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 H7C1H1 209 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 NDUFB8O95169 186 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 LAGE3Q14657 143 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 IGFL2Q6UWQ7 119 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 BRD3OSQ6XYD6 125 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 OR9G4Q8NGQ1 327 aa9.35□□□□□ -0.91
COPA-202ENST00000368069 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.34□□□□□ -0.912e-6■■■□□ 18.2
COPA-202ENST00000368069 NPFFO15130 113 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 C19orf54Q5BKX5 351 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 ODF3L1Q8IXM7 274 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 BEX4Q9NWD9 120 aaPredicted RBP9.34□□□□□ -0.91
COPA-202ENST00000368069 TNFRSF18Q9Y5U5 241 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 WDR87Q6ZQQ6 2873 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 CTSZQ9UBR2 303 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 JMJD8Q96S16 334 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
COPA-202ENST00000368069 KMT2EQ8IZD2 1858 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 A0A1B0GWB2 263 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 IGLC1P0CG04 106 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 SAA4P35542 130 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 OR2K2Q8NGT1 345 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
COPA-202ENST00000368069 CHTOPQ9Y3Y2 248 aaKnown RBP9.34□□□□□ -0.91
COPA-202ENST00000368069 PRR14LQ5THK1 2151 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 K7EM74 188 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 DUX3Q96PT4 197 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms