RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 ZNF883P0CG24 379 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 PSG7Q13046 419 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 LYZL1Q6UWQ5 148 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 ZNF114Q8NC26 417 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 SP9P0CG40 484 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 FXYD7P58549 80 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 LTBRP36941 435 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 NEGR1Q7Z3B1 354 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 C1orf159Q96HA4 380 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 TRAV40A0A0B4J280 105 aa6.02□□□□□ -1.44
SYNE1-208ENST00000367256 RNF5Q99942 180 aa6.02□□□□□ -1.44
SYNE1-208ENST00000367256 RSPO3Q9BXY4 272 aaPredicted RBP6.02□□□□□ -1.44
SYNE1-208ENST00000367256 CDKN1AP38936 164 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 VMO1Q7Z5L0 202 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 PLSCR4Q9NRQ2 329 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 SUPT4H1P63272 117 aaKnown RBP6.02□□□□□ -1.45
SYNE1-208ENST00000367256 LCNL1Q6ZST4 164 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 FAM208BQ5VWN6 2430 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 NUP35Q8NFH5 326 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 ANKHD1Q8IWZ3 2542 aaKnown RBP6.02□□□□□ -1.45
SYNE1-208ENST00000367256 PSG1P11464 419 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 RPL36AP83881 106 aaKnown RBP6.02□□□□□ -1.45
SYNE1-208ENST00000367256 SS18Q15532 418 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 TREML4Q6UXN2 200 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 RPL36ALQ969Q0 106 aaKnown RBP6.02□□□□□ -1.45
SYNE1-208ENST00000367256 WBP1Q96G27 269 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 VSIRQ9H7M9 311 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 DEFB104AQ8WTQ1 72 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 NEUROG3Q9Y4Z2 214 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 SELENOKQ9Y6D0 94 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 TRBV7-1A0A0A6YYK4 115 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 IGLV3-19P01714 112 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 LYPD3O95274 346 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 RPL35AP18077 110 aaKnown RBP6.02□□□□□ -1.45
SYNE1-208ENST00000367256 IGLV3-12A0A075B6K2 115 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 PMS2P5A8MQ11 134 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 PDE6HQ13956 83 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 SPSB3Q6PJ21 355 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 GFI1Q99684 422 aa6.02□□□□□ -1.45
SYNE1-208ENST00000367256 IGKV1-9A0A0C4DH69 117 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 VCYO14598 125 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 CMC4P56277 68 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-208ENST00000367256 NABP1Q96AH0 204 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 MLNRO43193 412 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 PAQR4Q8N4S7 273 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-208ENST00000367256 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-208ENST00000367256 ACACBO00763 2458 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV2-26A0A0B4J1V2 119 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 IGKV1D-43A0A0B4J1Z2 117 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 TMEM219Q86XT9 240 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 Q8TAT8 98 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 SRSF8Q9BRL6 282 aaKnown RBP6.01□□□□□ -1.45
SYNE1-208ENST00000367256 TFF1P04155 84 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 C6orf226Q5I0X4 101 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF319Q9P2F9 582 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 TCRAP04437 139 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 PSG3Q16557 428 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 KIAA1549LQ6ZVL6 1849 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 C9JAW5 83 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 SPATA31B1PQ5VZV4 182 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 PPDPFLQ8WWR9 84 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 OOSP1A8MZH6 123 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 MPV17L2Q567V2 206 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 SCRT1Q9BWW7 348 aa6.01□□□□□ -1.45
SYNE1-208ENST00000367256 C3orf79P0CE67 100 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 CDKN1BP46527 198 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 C10orf91Q5T1B1 145 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 TMEM158Q8WZ71 300 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 RPP25LQ8N5L8 163 aaKnown RBP6□□□□□ -1.45
SYNE1-208ENST00000367256 F8W1H4 67 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV3-53P01767 116 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 PRIMA1Q86XR5 153 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 A0A087WWL8 130 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF664Q8N3J9 261 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 SOCS3O14543 225 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF138P52744 262 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 RNASE6Q93091 150 aaKnown RBP6□□□□□ -1.45
SYNE1-208ENST00000367256 METRNQ9UJH8 293 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF876PQ49A33 203 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 C9orf106Q8NAJ2 232 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 NUP210LQ5VU65 1888 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 NDPQ00604 133 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF837Q96EG3 531 aaPredicted RBP6□□□□□ -1.45
SYNE1-208ENST00000367256 LYZL4Q96KX0 146 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 FAM223BA6NKX1 122 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 ANKRD39Q53RE8 183 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 FAM223AQ8IWN6 122 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 THAP8Q8NA92 274 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF492Q9P255 531 aa6□□□□□ -1.45
SYNE1-208ENST00000367256 HIVEP3Q5T1R4 2406 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 A0A0A6YYD4 124 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 HAPLN4Q86UW8 402 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV2-70P01814 119 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 TRACP01848 142 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 CRYGSP22914 178 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF329Q86UD4 541 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms