RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TSKUQ8WUA8 353 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 C22orf46C9J442 243 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 FNDC10F2Z333 226 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 NDUFB8O95169 186 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 ZNF138P52744 262 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 ATRAIDQ6UW56 229 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 NDUFA3O95167 84 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 PPBPP02775 128 aa9.31□□□□□ -0.92
SYNE1-204ENST00000367248 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-204ENST00000367248 INSP01308 110 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 TCTEX1D4Q5JR98 221 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 ADAMTS9Q9P2N4 1935 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 COX6CP09669 75 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 LIME1Q9H400 295 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 RFNGQ9Y644 331 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 PLXND1Q9Y4D7 1925 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 IGHV3-16A0A0C4DH30 117 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 COTL1Q14019 142 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 HELZP42694 1942 aaKnown RBP9.3□□□□□ -0.92
SYNE1-204ENST00000367248 LOC102724200A0A096LPH7 203 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-204ENST00000367248 IGHV4-38-2P0DP08 117 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-204ENST00000367248 CGB7P0DN87 165 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 IGLV2-23P01705 113 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 ZFP36P26651 326 aaKnown RBP9.3□□□□□ -0.92
SYNE1-204ENST00000367248 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 NRN1Q9NPD7 142 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 CTSZQ9UBR2 303 aa9.3□□□□□ -0.92
SYNE1-204ENST00000367248 IGHV4-39P01824 125 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 ZNF134P52741 427 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 MST1LQ2TV78 715 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 VCX2Q9H322 139 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 F2Z2F3 143 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 WISP2O76076 250 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-204ENST00000367248 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 RNF182Q8N6D2 247 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 LINC00469Q8N7U9 141 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 Q8NFD4 153 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 NUDT10Q8NFP7 164 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 NUDT11Q96G61 164 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 SNAI2O43623 268 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 IGKV1-39P01597 117 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 IGHV2-70P01814 119 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 IGKV1D-39P04432 117 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-204ENST00000367248 ERCC8Q13216 396 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 C11orf53Q8IXP5 236 aa9.29□□□□□ -0.92
SYNE1-204ENST00000367248 CD28P10747 220 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 MALRD1Q5VYJ5 2156 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-204ENST00000367248 LYL1P12980 280 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 C8orf86Q6ZUL3 223 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 KLK9Q9UKQ9 250 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 H3BRM9 83 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 IGHV2-5P01817 119 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 TDGF1P3P51864 188 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 PAX9P55771 341 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 COPS9Q8WXC6 57 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 KLF2Q9Y5W3 355 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-204ENST00000367248 A0A087WWL8 130 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 TCF23Q7RTU1 214 aa9.28□□□□□ -0.92
SYNE1-204ENST00000367248 IFI27P40305 119 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-204ENST00000367248 ERASQ7Z444 233 aa9.27□□□□□ -0.92
SYNE1-204ENST00000367248 ZNF876PQ49A33 203 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 A0A1B0GW64 132 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
SYNE1-204ENST00000367248 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 TRBV7-9A0A0J9YWB2 115 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE12BA1L429 117 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE7O76087 117 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 SEM1Q6ZVN7 128 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 C1QL4Q86Z23 238 aa9.27□□□□□ -0.93
SYNE1-204ENST00000367248 MCRIP2Q9BUT9 160 aaKnown RBP9.27□□□□□ -0.93
SYNE1-204ENST00000367248 NXT2Q9NPJ8 142 aaKnown RBP9.27□□□□□ -0.93
SYNE1-204ENST00000367248 WT1-ASQ06250 92 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 HAPLN4Q86UW8 402 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 DYSFO75923 2080 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 RPL36AP83881 106 aaKnown RBP9.26□□□□□ -0.93
SYNE1-204ENST00000367248 PSG3Q16557 428 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 COL5A1-AS1Q5SY13 56 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 TMEM170AQ8WVE7 144 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 RPL36ALQ969Q0 106 aaKnown RBP9.26□□□□□ -0.93
SYNE1-204ENST00000367248 PTPRDP23468 1912 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 WIPF3A6NGB9 483 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 HOXA5P20719 270 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms