RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 RFNGQ9Y644 331 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 CCL25O15444 150 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 GNG5P63218 68 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 CRIP3Q6Q6R5 217 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q9H3A6 140 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 OTORQ9NRC9 128 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 NDUFC2O95298 119 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q0VG73 95 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 EBLN2Q6P2I7 272 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 GAFA1Q96PS6 74 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PYGO2Q9BRQ0 406 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 FGF23Q9GZV9 251 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 METRNQ9UJH8 293 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 C15orf65H3BRN8 121 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 ASIPP42127 132 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PMVKQ15126 192 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 LSM4Q9Y4Z0 139 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PKDREJQ9NTG1 2253 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PLNP26678 52 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 MORN3Q6PF18 240 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 RPRMLQ8N4K4 120 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGLV3-9A0A075B6K5 115 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM106CPP0CH98 169 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PF4V1P10720 104 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 SLAQ13239 276 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PVRIGQ6DKI7 326 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGF2-ASQ6U949 168 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PTPRBP23467 1997 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 REG1AP05451 166 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 YPEL3P61236 119 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 LINC00311Q8N616 119 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 TMEM133Q9H2Q1 129 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 DPM3Q9P2X0 92 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 ECSCRQ19T08 205 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 STPG4Q8N801 248 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 C8orf46Q8TAG6 207 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 RNASE8Q8TDE3 154 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 TMEM126AQ9H061 195 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 ORMDL2Q53FV1 153 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q6ZR03 302 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 HAPLN4Q86UW8 402 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 TMEM14BQ9NUH8 114 aa4.38□□□□□ -1.71
CDC42BPA-204ENST00000366767 PHLDA1Q8WV24 401 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 MMP23AO75900 390 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 GHRHP01286 108 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 CR1LQ2VPA4 569 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 C11orf52Q96A22 123 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 TRAV8-3A0A0A6YYJ7 113 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 TMEM178BH3BS89 294 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 M0R381 172 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 COA6Q5JTJ3 125 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 TEX36Q5VZQ5 186 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q6ZWC4 215 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 C8orf31Q8N9H6 132 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 PPBPP02775 128 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 LAGE3Q14657 143 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 TRGV9Q99603 122 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 PLCE1Q9P212 2302 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 BVES-AS1Q5T3Y7 98 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 CDPF1Q6NVV7 123 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 LCNL1Q6ZST4 164 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 CCL21O00585 134 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 BSPH1Q075Z2 132 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM201AQ5SY85 155 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 RNASE6Q93091 150 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGKV3OR2-268A0A0C4DH90 116 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGLC7A0M8Q6 106 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 J3KT08 172 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 TEX43Q6ZNM6 134 aa4.37□□□□□ -1.71
CDC42BPA-204ENST00000366767 H0YJW9 148 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 ETDBQ3ZM63 59 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 LYPD1Q8N2G4 141 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 ARPC1AQ92747 370 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 ROS1P08922 2347 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 H7C1H1 209 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 TMEM200BQ69YZ2 307 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM159AQ6UWV7 190 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF833PQ6ZTB9 187 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 TNFRSF18Q9Y5U5 241 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 CRYBA4P53673 196 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 C17orf58Q2M2W7 97 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 C11orf53Q8IXP5 236 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 RAX2Q96IS3 184 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 MCRIP2Q9BUT9 160 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 ACACAQ13085 2346 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 OOSP1A8MZH6 123 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 SLC25A20O43772 301 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 TMEM258P61165 79 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 NPC2P61916 151 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 CT83Q5H943 113 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 OVOL2Q9BRP0 275 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 SPTAN1Q13813 2472 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 PMS2P5A8MQ11 134 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 VWC2LB2RUY7 222 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 D6R8Y8 96 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 TOMM40O96008 361 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 SCRT1Q9BWW7 348 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms