RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TRAV18A0A075B6X5 111 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 INS-IGF2F8WCM5 200 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 IL4P05112 153 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 ANXA3P12429 323 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 TSPOP30536 169 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 TNFSF8P32971 234 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 OPRK1P41145 380 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 PSMB3P49720 205 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 RND2P52198 227 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 NCS1P62166 190 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 LSM3P62310 102 aaKnown RBP5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 PHLDA2Q53GA4 152 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 SFXN4Q6P4A7 337 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 DHRS11Q6UWP2 260 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 H2BFWTQ7Z2G1 175 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 SLC24A4Q8NFF2 622 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR5AP2Q8NGF4 316 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 GLYATL2Q8WU03 294 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 TMEM170AQ8WVE7 144 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 SLC25A38Q96DW6 304 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 VSIG2Q96IQ7 327 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 PFDN5Q99471 154 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 C2orf88Q9BSF0 95 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 SRRQ9GZT4 340 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 MED28Q9H204 178 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 KLK11Q9UBX7 282 aa5.73□□□□□ -1.49
HMGB1P39-201ENST00000366304 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 A0A096LPF7 62 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 FAM240BA0A1B0GVZ2 78 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 TMEM127O75204 238 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 RLN2P04090 185 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 PRB4P10163 310 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR10J1P30954 320 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 TGFBR1P36897 503 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 GPX4P36969 197 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 SNCAP37840 140 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 YPEL3P61236 119 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 HERV-K104P61576 105 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 AARDQ4LEZ3 155 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 LINC00612Q8N6U2 182 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR11H7Q8NGC8 314 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR51G1Q8NGK1 321 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR1S2Q8NGQ3 325 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 Q8WTZ3 238 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 AP3S1Q92572 193 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 SDHCQ99643 169 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 ZNF2Q9BSG1 426 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 TMPRSS5Q9H3S3 457 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 AUNIPQ9H7T9 357 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 NOP10Q9NPE3 64 aaKnown RBP5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 KCNIP3Q9Y2W7 256 aa5.72□□□□□ -1.49
HMGB1P39-201ENST00000366304 A0A0G2JRQ6 117 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 INMT-MINDY4F8WBC2 141 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 SIVA1O15304 175 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 NXPH4O95158 308 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 RAB3DO95716 219 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 OXTP01178 125 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 PSG1P11464 419 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 PVALBP20472 110 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 SCAND1P57086 179 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 IDNKQ5T6J7 187 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 IGFL4Q6B9Z1 124 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 TBC1D26Q86UD7 250 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 SVBPQ8N300 66 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 COQ8AQ8NI60 647 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 RAB24Q969Q5 203 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 ABHD1Q96SE0 405 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 NKX6-2Q9C056 277 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 SLC25A32Q9H2D1 315 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 EHFQ9NZC4 300 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 DOK5Q9P104 306 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 ALG5Q9Y673 324 aa5.71□□□□□ -1.5
HMGB1P39-201ENST00000366304 TRAV30A0A087WSZ9 112 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 FABP12A6NFH5 140 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 CORTO00230 105 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 GPR31O00270 319 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 NDUFS6O75380 124 aaKnown RBP5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 EIF3GO75821 320 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 TOMM40O96008 361 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 INSP01308 110 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 PMP2P02689 132 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 ID1P41134 155 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 INPP1P49441 399 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 CNN1P51911 297 aaKnown RBP5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 RAB2AP61019 212 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 SPATA31B1PQ5VZV4 182 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 TRIQKQ629K1 86 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 EBLN2Q6P2I7 272 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 SLC35G3Q8N808 338 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 RNASE8Q8TDE3 154 aaKnown RBP5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 ASB13Q8WXK3 278 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 NPIPB3Q92617 1050 aa5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 SLC25A39Q9BZJ4 359 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P39-201ENST00000366304 NUDT15Q9NV35 164 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms