RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZNF292O60281 2723 aa-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 FLNAP21333 2647 aaKnown RBP-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 FAT3Q8TDW7 4589 aa-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 PDE6DO43924 150 aa-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 OR5AS1Q8N127 324 aa-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 OR51A2Q8NGJ7 313 aa-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 POP5Q969H6 163 aaKnown RBP-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 CCDC94Q9BW85 323 aaPredicted RBP-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 ERBINQ96RT1 1412 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 TGP01266 2768 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 IGLV1-51P01701 117 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 CD3DP04234 171 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 RRN3P1Q2M238 152 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 CCDC42Q96M95 316 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 CCL19Q99731 98 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 LPAP08519 4548 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 EPG5Q9HCE0 2579 aa-0.54□□□□□ -2.5
RNU4-28P-201ENST00000364739 ABCA2Q9BZC7 2435 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 USP9XQ93008 2570 aaPredicted RBP-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 OMPP47874 163 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 RANP62826 216 aaKnown RBP-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 IMPG1Q17R60 797 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 OCIAD2Q56VL3 154 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 TMEM14EPQ6UXP3 125 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 TRAPPC5Q8IUR0 188 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 YPEL2Q96QA6 119 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 TRIM4Q9C037 500 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 RNF11Q9Y3C5 154 aa-0.55□□□□□ -2.5
RNU4-28P-201ENST00000364739 HSPG2P98160 4391 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 A0A087WSZ3 146 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 TRAV4A0A0B4J268 109 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 RPS17P08708 135 aaKnown RBP-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 KRTAP20-1Q3LI63 56 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 BCL2L15Q5TBC7 163 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 PRR15Q8IV56 129 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 BSNQ9UPA5 3926 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 NBEAL1Q6ZS30 2694 aa-0.56□□□□□ -2.5
RNU4-28P-201ENST00000364739 CELSR3Q9NYQ7 3312 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 COL12A1Q99715 3063 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 VWFP04275 2813 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 NBEAL2Q6ZNJ1 2754 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 C17orf112F2Z3M2 114 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 CST8O60676 142 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 LIMD2Q9BT23 127 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 FMN1Q68DA7 1419 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 COL6A5A8TX70 2615 aa-0.57□□□□□ -2.5
RNU4-28P-201ENST00000364739 HECTD1Q9ULT8 2610 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 LRP1BQ9NZR2 4599 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 TMEM256-PLSCR3K7ERE1 68 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 TAX1BP3O14907 124 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 LY6G6CO95867 125 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 UBE2BP63146 152 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 MYL5Q02045 173 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 EIF3IQ13347 325 aaKnown RBP-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 OR10AG1Q8NH19 301 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 NPCDR1Q9BY65 106 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 CCDC144AA2RUR9 1427 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 MIA2Q96PC5 1412 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 CACNA1CQ13936 2221 aa-0.58□□□□□ -2.5
RNU4-28P-201ENST00000364739 N4BP2Q86UW6 1770 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 UBR2Q8IWV8 1755 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 USP9YO00507 2555 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 OR7C1O76099 320 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 ERP29P30040 261 aaKnown RBP-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 ATP5G3P48201 142 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 EDDM3AQ14507 147 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 ASXL3Q9C0F0 2248 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 CACNA1AO00555 2505 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 ITPR3Q14573 2671 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 NIPBLQ6KC79 2804 aaeCLIP-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 MYO18BQ8IUG5 2567 aa-0.59□□□□□ -2.5
RNU4-28P-201ENST00000364739 ANK2Q01484 3957 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 C9orf170A2RU37 121 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 AESQ08117 197 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 EIF5AL1Q6IS14 154 aaKnown RBP-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 ARPINQ7Z6K5 226 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 OR5D16Q8NGK9 328 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 TCEAL2Q9H3H9 227 aaPredicted RBP-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 HSPB8Q9UJY1 196 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 ARL5AQ9Y689 179 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 WDR87Q6ZQQ6 2873 aa-0.6□□□□□ -2.51
RNU4-28P-201ENST00000364739 OR10J4P0C629 311 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 RPL37AP61513 92 aaKnown RBP-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 HIST1H3AP68431 136 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 H3F3AP84243 136 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 PATE2Q6UY27 113 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 S100A7AQ86SG5 101 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 LYG2Q86SG7 212 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 KIFC1Q9BW19 673 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 FAT2Q9NYQ8 4349 aa-0.61□□□□□ -2.51
RNU4-28P-201ENST00000364739 HECTD4Q9Y4D8 3996 aa-0.62□□□□□ -2.51
RNU4-28P-201ENST00000364739 HLA-EP13747 358 aa-0.62□□□□□ -2.51
RNU4-28P-201ENST00000364739 RAB5CP51148 216 aa-0.62□□□□□ -2.51
RNU4-28P-201ENST00000364739 DYNLT3P51808 116 aa-0.62□□□□□ -2.51
RNU4-28P-201ENST00000364739 CHCHD1Q96BP2 118 aaKnown RBP-0.62□□□□□ -2.51
RNU4-28P-201ENST00000364739 ZFYVE9O95405 1425 aa-0.63□□□□□ -2.51
RNU4-28P-201ENST00000364739 UNC79Q9P2D8 2635 aa-0.63□□□□□ -2.51
RNU4-28P-201ENST00000364739 TRBV19A0A075B6N1 114 aa-0.63□□□□□ -2.51
RNU4-28P-201ENST00000364739 GPR31O00270 319 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms