RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 ACANP16112 2415 aa-0.61□□□□□ -2.51
RNU6-553P-201ENST00000364047 CETN3O15182 167 aa-0.61□□□□□ -2.51
RNU6-553P-201ENST00000364047 OR10J4P0C629 311 aa-0.61□□□□□ -2.51
RNU6-553P-201ENST00000364047 POP5Q969H6 163 aaKnown RBP-0.61□□□□□ -2.51
RNU6-553P-201ENST00000364047 TRIM4Q9C037 500 aa-0.61□□□□□ -2.51
RNU6-553P-201ENST00000364047 BOKQ9UMX3 212 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-553P-201ENST00000364047 LOC285556D6RIA3 1793 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 PLXNA4Q9HCM2 1894 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 COTL1Q14019 142 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 EIF5AL1Q6IS14 154 aaKnown RBP-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 OR51A2Q8NGJ7 313 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 DDI1Q8WTU0 396 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 RMND5BQ96G75 393 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 PRELID3BQ9Y3B1 194 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 HSPG2P98160 4391 aa-0.62□□□□□ -2.51
RNU6-553P-201ENST00000364047 TRAV27A0A087WT01 109 aa-0.63□□□□□ -2.51
RNU6-553P-201ENST00000364047 IGLV1-51P01701 117 aa-0.63□□□□□ -2.51
RNU6-553P-201ENST00000364047 IMPG1Q17R60 797 aa-0.63□□□□□ -2.51
RNU6-553P-201ENST00000364047 ARPINQ7Z6K5 226 aa-0.63□□□□□ -2.51
RNU6-553P-201ENST00000364047 ARL5AQ9Y689 179 aa-0.63□□□□□ -2.51
RNU6-553P-201ENST00000364047 MYH10P35580 1976 aa-0.63□□□□□ -2.51
RNU6-553P-201ENST00000364047 FMN1Q68DA7 1419 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 PIEZO1Q92508 2521 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 MYO18BQ8IUG5 2567 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 TAX1BP3O14907 124 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 RAB5CP51148 216 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 UBE2BP63146 152 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 HIST1H3AP68431 136 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 H3F3AP84243 136 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 EDDM3AQ14507 147 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 KRTAP19-8Q3LI54 63 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 TRAPPC5Q8IUR0 188 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 OR5D16Q8NGK9 328 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 NPCDR1Q9BY65 106 aa-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 FASNP49327 2511 aaKnown RBP-0.64□□□□□ -2.51
RNU6-553P-201ENST00000364047 SCN8AQ9UQD0 1980 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 FLNAP21333 2647 aaKnown RBP-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 FANCMQ8IYD8 2048 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 TRAV4A0A0B4J268 109 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 HLA-EP13747 358 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 ERP29P30040 261 aaKnown RBP-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 VBP1P61758 197 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 Q5BKY6 102 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 S100A7AQ86SG5 101 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 CCDC42Q96M95 316 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 PIK3C2GO75747 1445 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 ERBINQ96RT1 1412 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 IGF2RP11717 2491 aa-0.65□□□□□ -2.51
RNU6-553P-201ENST00000364047 CELSR3Q9NYQ7 3312 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 SMIM23A6NLE4 172 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 CST8O60676 142 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 LY6G6CO95867 125 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 SERPINB9P50453 376 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 TMEM14EPQ6UXP3 125 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 HYLS1Q96M11 299 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 USP9YO00507 2555 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 FLNCQ14315 2725 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 PTPN13Q12923 2485 aa-0.66□□□□□ -2.52
RNU6-553P-201ENST00000364047 LAMA2P24043 3122 aaKnown RBP-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 TGP01266 2768 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 TRBV19A0A075B6N1 114 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 RPL37AP61513 92 aaKnown RBP-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 ASB16-AS1Q495Z4 193 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 CASC2Q6XLA1 102 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 OR4K15Q8NH41 348 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 CHCHD1Q96BP2 118 aaKnown RBP-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 TEX37Q96LM6 180 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 IMUPQ9GZP8 106 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 PARVBQ9HBI1 364 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 CELSR1Q9NYQ6 3014 aa-0.67□□□□□ -2.52
RNU6-553P-201ENST00000364047 A0A096LPI6 279 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 ODAMA1E959 279 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 FAM159BA6NKW6 160 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 TMEM256-PLSCR3K7ERE1 68 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 OBSL1O75147 1896 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 GGCTO75223 188 aaKnown RBP-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 DYNLT3P51808 116 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 KRTAP19-6Q3LI70 58 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 PATE2Q6UY27 113 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 OTUD6BQ8N6M0 293 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 GNPDA2Q8TDQ7 276 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 MYH7BA7E2Y1 1941 aa-0.68□□□□□ -2.52
RNU6-553P-201ENST00000364047 MGAMO43451 1857 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 ATP5G3P48201 142 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 CAV3P56539 151 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 MYL6P60660 151 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 TMEM97Q5BJF2 176 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 LINC00299Q6ZSB3 139 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 LRRC18Q8N456 261 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 LIMD2Q9BT23 127 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 CHD9Q3L8U1 2897 aa-0.69□□□□□ -2.52
RNU6-553P-201ENST00000364047 PTPRFP10586 1907 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 CHD6Q8TD26 2715 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 LRP1BQ9NZR2 4599 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 C9orf170A2RU37 121 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 LYPLA2O95372 231 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 AESQ08117 197 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 SPINK13Q1W4C9 94 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 KIFC1Q9BW19 673 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms