RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SH2D1AO60880 128 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 MCRIP2Q9BUT9 160 aaKnown RBP10.84□□□□□ -0.67
LDB3-202ENST00000361373 VCYO14598 125 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 PLP1P60201 277 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 LAGE3Q14657 143 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 VGLL1Q99990 258 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 TRAV12-3A0A0B4J271 114 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 C1QL4Q86Z23 238 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 RNF182Q8N6D2 247 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 ACACBO00763 2458 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 TCF21O43680 179 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 NDUFA3O95167 84 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 LINC00587B1AMM8 73 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 IGHV2-70P01814 119 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 IGHV2-5P01817 119 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
LDB3-202ENST00000361373 MYLKQ15746 1914 aa10.83□□□□□ -0.68
LDB3-202ENST00000361373 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
LDB3-202ENST00000361373 NIT1Q86X76 327 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 TECTAO75443 2155 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 HELZP42694 1942 aaKnown RBP10.82□□□□□ -0.68
LDB3-202ENST00000361373 SLC25A2Q9BXI2 301 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 MLANAQ16655 118 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 Q86TA4 180 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 CHTOPQ9Y3Y2 248 aaKnown RBP10.82□□□□□ -0.68
LDB3-202ENST00000361373 ZGRF1Q86YA3 2104 aa10.82□□□□□ -0.68
LDB3-202ENST00000361373 FAM231BA6NCW3 169 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
LDB3-202ENST00000361373 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 ZNRD1Q9P1U0 126 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 MALRD1Q5VYJ5 2156 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 RHODO00212 210 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 PLNP26678 52 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 DEFB131AP59861 70 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 ZNF876PQ49A33 203 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 TRAV9-2A0A087WT02 112 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 DKK4Q9UBT3 224 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 RPL35AP18077 110 aaKnown RBP10.81□□□□□ -0.68
LDB3-202ENST00000361373 TMEM75Q8N9X5 138 aa10.81□□□□□ -0.68
LDB3-202ENST00000361373 CTAG1AP78358 180 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 MORN3Q6PF18 240 aaPredicted RBP10.8□□□□□ -0.68
LDB3-202ENST00000361373 Q8TAT8 98 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 C14orf144Q96I85 54 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 TRBV7-9A0A0J9YWB2 115 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 DUX4L9Q6RFH8 374 aaPredicted RBP10.8□□□□□ -0.68
LDB3-202ENST00000361373 PRO3102Q9H379 93 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 ZNF492Q9P255 531 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 RNASE1P07998 156 aaKnown RBP10.8□□□□□ -0.68
LDB3-202ENST00000361373 DEFB121Q5J5C9 76 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 K7EM74 188 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 DERL1Q9BUN8 251 aa10.8□□□□□ -0.68
LDB3-202ENST00000361373 IGKCP01834 107 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 GZMBP10144 247 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 EVI2AP22794 236 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 Q6ZSR3 168 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 TMEM86BQ8N661 226 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 MRPL27Q9P0M9 148 aaKnown RBP10.79□□□□□ -0.68
LDB3-202ENST00000361373 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 G3V318 75 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 ARL6IP6Q8N6S5 226 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 NOTCH3Q9UM47 2321 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 DAZAP2Q15038 168 aaPredicted RBP10.79□□□□□ -0.68
LDB3-202ENST00000361373 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 DOCK10Q96BY6 2186 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 D6R8Y8 96 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 CT83Q5H943 113 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
LDB3-202ENST00000361373 FAM90A2PQ658T7 463 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 UBE2DNLQ8IWF7 75 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 OR5A1Q8NGJ0 315 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 TRBV19A0A075B6N1 114 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 SCGB1A1P11684 91 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 MS4A6AQ9H2W1 248 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 SLC25A20O43772 301 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 KRTAP27-1Q3LI81 207 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 OR11H6Q8NGC7 330 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 TRAV8-1A0A0A6YYK1 113 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 C22orf46C9J442 243 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 IGKV1-39P01597 117 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 IGKV1D-39P04432 117 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 LINC00469Q8N7U9 141 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 PAX9P55771 341 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 DEFB113Q30KQ7 82 aa10.78□□□□□ -0.68
LDB3-202ENST00000361373 WT1-ASQ06250 92 aa10.77□□□□□ -0.68
LDB3-202ENST00000361373 C11orf53Q8IXP5 236 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms