RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DUX5Q96PT3 197 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 SLC25A2Q9BXI2 301 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 ST20Q9HBF5 79 aa13.14□□□□□ -0.31
SCAF1-201ENST00000360565 NXT2Q9NPJ8 142 aaKnown RBP13.14□□□□□ -0.31
SCAF1-201ENST00000360565 DYSFO75923 2080 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 MUC22E2RYF6 1773 aaPredicted RBP13.13□□□□□ -0.31
SCAF1-201ENST00000360565 TRAV41A0A0B4J266 112 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 K7ENP7 123 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 EREGO14944 169 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
SCAF1-201ENST00000360565 VWC2Q2TAL6 325 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 LINC00311Q8N616 119 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 ARL6IP6Q8N6S5 226 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 KLF2Q9Y5W3 355 aaPredicted RBP13.13□□□□□ -0.31
SCAF1-201ENST00000360565 PLXNB1O43157 2135 aa13.13□□□□□ -0.31
SCAF1-201ENST00000360565 SRD5A1P18405 259 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 NDUFA3O95167 84 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 IGFL2Q6UWQ7 119 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 WNK1Q9H4A3 2382 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 SH2D1AO60880 128 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 NDPQ00604 133 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 CDPF1Q6NVV7 123 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 ZNF562Q6V9R5 426 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 LSM4Q9Y4Z0 139 aaKnown RBP13.12□□□□□ -0.31
SCAF1-201ENST00000360565 F2Z2F3 143 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
SCAF1-201ENST00000360565 LGALS3P17931 250 aaKnown RBP13.12□□□□□ -0.31
SCAF1-201ENST00000360565 PPP1R17O96001 155 aa13.11□□□□□ -0.31
SCAF1-201ENST00000360565 RAX2Q96IS3 184 aa13.11□□□□□ -0.31
SCAF1-201ENST00000360565 TRAV21A0A0B4J279 112 aa13.11□□□□□ -0.31
SCAF1-201ENST00000360565 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
SCAF1-201ENST00000360565 SLAQ13239 276 aa13.11□□□□□ -0.31
SCAF1-201ENST00000360565 AMN1Q8IY45 258 aa13.11□□□□□ -0.31
SCAF1-201ENST00000360565 SYS1-DBNDD2H3BUS1 97 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 Q6ZWC4 215 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
SCAF1-201ENST00000360565 H3BUT2 72 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 WFDC12Q8WWY7 111 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 MOB4Q9Y3A3 225 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 HAX1O00165 279 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 CD7P09564 240 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 SAA4P35542 130 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 TMEM249Q2WGJ8 235 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 C5orf30Q96GV9 206 aa13.1□□□□□ -0.31
SCAF1-201ENST00000360565 LHBP01229 141 aa13.09□□□□□ -0.31
SCAF1-201ENST00000360565 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
SCAF1-201ENST00000360565 K7EN84 100 aa13.09□□□□□ -0.31
SCAF1-201ENST00000360565 C11orf1Q9H5F2 150 aa13.09□□□□□ -0.31
SCAF1-201ENST00000360565 SSBP2P81877 361 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-201ENST00000360565 SRSF8Q9BRL6 282 aaKnown RBP13.09□□□□□ -0.31
SCAF1-201ENST00000360565 CEP295Q9C0D2 2601 aa13.09□□□□□ -0.31
SCAF1-201ENST00000360565 NDUFB8O95169 186 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 C10orf142B7Z368 130 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 SMKR1H3BMG3 65 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 NPFFO15130 113 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 H3BUX3 64 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 PYGO2Q9BRQ0 406 aa13.08□□□□□ -0.32
SCAF1-201ENST00000360565 PAX1P15863 534 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 MPV17L2Q567V2 206 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 ALKBH7Q9BT30 221 aaPredicted RBP13.07□□□□□ -0.32
SCAF1-201ENST00000360565 SNHG12Q9BXW3 62 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 JKAMPQ9P055 326 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 MYO18BQ8IUG5 2567 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 DLEU1O43261 78 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 DPM2O94777 84 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
SCAF1-201ENST00000360565 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 SMIM12Q96EX1 92 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 C20orf144Q9BQM9 153 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 SPCS1Q9Y6A9 102 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 MSMPQ1L6U9 139 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 TMEM190Q8WZ59 177 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 MS4A6AQ9H2W1 248 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 PDE6HQ13956 83 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 PAPPA-AS1Q5QFB9 102 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 FAM231DQ6ZW35 169 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
SCAF1-201ENST00000360565 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
SCAF1-201ENST00000360565 GNLYP22749 145 aa13.06□□□□□ -0.32
SCAF1-201ENST00000360565 SEM1Q6ZVN7 128 aa13.06□□□□□ -0.32
SCAF1-201ENST00000360565 NHP2Q9NX24 153 aaKnown RBP13.06□□□□□ -0.32
SCAF1-201ENST00000360565 ZNF492Q9P255 531 aa13.06□□□□□ -0.32
SCAF1-201ENST00000360565 MYO9AB2RTY4 2548 aa13.05□□□□□ -0.32
SCAF1-201ENST00000360565 IFI27P40305 119 aaPredicted RBP13.05□□□□□ -0.32
SCAF1-201ENST00000360565 A0A087X0K7 114 aa13.05□□□□□ -0.32
SCAF1-201ENST00000360565 TMEM213A2RRL7 107 aa13.05□□□□□ -0.32
SCAF1-201ENST00000360565 GFRA4Q9GZZ7 299 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms