RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 C2orf66Q6UXQ4 117 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 C14orf132Q9NPU4 83 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 FUSP35637 526 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTNND1-201ENST00000358694 CACNA1SQ13698 1873 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 IGHV1-24A0A0C4DH33 117 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 CCL18P55774 89 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 Q86TA4 180 aa7.18□□□□□ -1.26
CTNND1-201ENST00000358694 PAQR4Q8N4S7 273 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-201ENST00000358694 CDKN1BP46527 198 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 ZFP36L1Q07352 338 aaKnown RBP7.17□□□□□ -1.26
CTNND1-201ENST00000358694 STPG4Q8N801 248 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 TAF1P21675 1872 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 LMO1P25800 156 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 GLRX5Q86SX6 157 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 SHANK2-AS3Q9BTD1 123 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 SDHAF1A6NFY7 115 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 PFN1P07737 140 aaKnown RBP7.17□□□□□ -1.26
CTNND1-201ENST00000358694 CACNA1GO43497 2377 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 SCN9AQ15858 1988 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 SCN8AQ9UQD0 1980 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 ITGB4P16144 1822 aa7.17□□□□□ -1.26
CTNND1-201ENST00000358694 HERVK_113P63121 156 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 EIF4EBP2Q13542 120 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-201ENST00000358694 C8orf49Q96NF6 230 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 IGLV3-12A0A075B6K2 115 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 RS1O15537 224 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 FGF6P10767 208 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 SHISA9B4DS77 424 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 UBE2CO00762 179 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 C3orf79P0CE67 100 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 HS3ST6Q96QI5 342 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 ECM29Q5VYK3 1845 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 TMEM213A2RRL7 107 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 CFHR4Q92496 578 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 LINC01551Q86U37 167 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 NOP10Q9NPE3 64 aaKnown RBP7.16□□□□□ -1.26
CTNND1-201ENST00000358694 SPANXA1Q9NS26 97 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 NHSQ6T4R5 1651 aa7.16□□□□□ -1.26
CTNND1-201ENST00000358694 IGKV1D-12P01611 117 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 MP68P56378 58 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 RHOHQ15669 191 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 ATRAIDQ6UW56 229 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 CARD19Q96LW7 228 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 NUP214P35658 2090 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-201ENST00000358694 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 IGKV1D-8A0A087WSZ0 117 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 TRAV26-2A0A0B4J265 109 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 SHISA3A0PJX4 238 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 G3V318 75 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
CTNND1-201ENST00000358694 CAMK2N2Q96S95 79 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 LAMB1P07942 1786 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 A0A1B0GUS0 222 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 IGLV3-19P01714 112 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 MPZP25189 248 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
CTNND1-201ENST00000358694 NTF4P34130 210 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 PDE6HQ13956 83 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 SRSF8Q9BRL6 282 aaKnown RBP7.15□□□□□ -1.27
CTNND1-201ENST00000358694 SMCHD1A6NHR9 2005 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 SCN1AP35498 2009 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 CDK5RAP2Q96SN8 1893 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 A0A0A6YYD4 124 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 IGKV1-12A0A0C4DH73 117 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 E7EQL1 145 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 CXCL1P09341 107 aa7.15□□□□□ -1.27
CTNND1-201ENST00000358694 TJP1Q07157 1748 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 F8W735 103 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-201ENST00000358694 J3QLI3 93 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 NDUFB8O95169 186 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IGHV3-30P01768 117 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IGHV3-33P01772 117 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IGHV3-30-3P0DP02 117 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IGHV3-30-5P0DP03 117 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 CRYBA4P53673 196 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 HGFACQ04756 655 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 Q8N8P6 123 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 GLI3P10071 1580 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IGLV3-32A0A0A0MS00 114 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 FAM104BQ5XKR9 115 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 C9orf47Q6ZRZ4 202 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 TMEM75Q8N9X5 138 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 SHANK3Q9BYB0 1731 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 RGPD4Q7Z3J3 1758 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 SCN7AQ01118 1682 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IGHG2P01859 326 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 IFITM1P13164 125 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 CRYGSP22914 178 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 MLANAQ16655 118 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 ZNF362Q5T0B9 420 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-201ENST00000358694 HIST3H2BBQ8N257 126 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 GFRA4Q9GZZ7 299 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 ESPL1Q14674 2120 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
CTNND1-201ENST00000358694 PIFOQ8TCI5 191 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms