RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 NBR2O15453 112 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 ZNF329Q86UD4 541 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 FAM57AQ8TBR7 257 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 S4R3C0 116 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3-23P01764 117 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 PDLIM4P50479 330 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 NABP1Q96AH0 204 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 ANAPC10Q9UM13 185 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE2AQ6NT46 116 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 SMRP1Q8NCR6 262 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3OR16-10A0A075B7F0 116 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 TRGV3P03979 118 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 TNRC6BQ9UPQ9 1833 aaKnown RBP7.22□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE12JA6NER3 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 PMS2P5A8MQ11 134 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 SIVA1O15304 175 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE7O76087 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE12FP0CL80 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE12GP0CL81 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE12IP0CL82 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 TFF2Q03403 129 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 GAGE4Q13068 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 DPM3Q9P2X0 92 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 IGKV1-12A0A0C4DH73 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 IGKV1D-12P01611 117 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 NSUN5P1Q3KNT7 163 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 MDS2Q8NDY4 140 aa7.21□□□□□ -1.25
COL6A6-201ENST00000358511 C2CD3Q4AC94 2353 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 CRYGSP22914 178 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 NEGR1Q7Z3B1 354 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 CEND1Q8N111 149 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 SLC25A45Q8N413 288 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 LEPROTO15243 131 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 LINC01587Q99440 93 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 E9PQ18 207 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 RBMY1FQ15415 496 aaKnown RBP7.21□□□□□ -1.26
COL6A6-201ENST00000358511 LCNL1Q6ZST4 164 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 LIME1Q9H400 295 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 MRPS18CQ9Y3D5 142 aaKnown RBP7.21□□□□□ -1.26
COL6A6-201ENST00000358511 CELA3BP08861 270 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 RFPL3SP0C7P2 107 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 FXYD7P58549 80 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 GAGE5Q13069 117 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 GAGE6Q13070 117 aa7.21□□□□□ -1.26
COL6A6-201ENST00000358511 B9A039 149 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 TRACP01848 142 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 PNRC2Q9NPJ4 139 aaKnown RBP7.2□□□□□ -1.26
COL6A6-201ENST00000358511 MYO18BQ8IUG5 2567 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 NTF4P34130 210 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 COA6Q5JTJ3 125 aaKnown RBP7.2□□□□□ -1.26
COL6A6-201ENST00000358511 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 C5orf47Q569G3 176 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 FAM216BQ8N7L0 139 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 TMEM75Q8N9X5 138 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 BAALCQ8WXS3 180 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 FCN3O75636 299 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 PDE6HQ13956 83 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 Q86TA4 180 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 MCRIP2Q9BUT9 160 aaKnown RBP7.2□□□□□ -1.26
COL6A6-201ENST00000358511 SCRT1Q9BWW7 348 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 V9GYV3 84 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 IGKV2-40A0A087WW87 121 aaPredicted RBP7.2□□□□□ -1.26
COL6A6-201ENST00000358511 H3BMG7 143 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 IGKV2D-40P01614 121 aaPredicted RBP7.2□□□□□ -1.26
COL6A6-201ENST00000358511 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 PRSS57Q6UWY2 283 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 CUL9Q8IWT3 2517 aa7.2□□□□□ -1.26
COL6A6-201ENST00000358511 SH2D1AO60880 128 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 TIAF1O95411 115 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 ABHD17AQ96GS6 310 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 EFEMP2O95967 443 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 CYYR1Q96J86 154 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 CDCP2Q5VXM1 449 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 LSM4Q9Y4Z0 139 aaKnown RBP7.19□□□□□ -1.26
COL6A6-201ENST00000358511 SP9P0CG40 484 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
COL6A6-201ENST00000358511 TMEM258P61165 79 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 KLHDC3Q9BQ90 382 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 FAM208BQ5VWN6 2430 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 IGHV3OR16-8A0A075B7F1 116 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 CLEC19AQ6UXS0 136 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 HAPLN4Q86UW8 402 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 OR11H6Q8NGC7 330 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 NPC2P61916 151 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 SIGLEC15Q6ZMC9 328 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 TMEM126AQ9H061 195 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 MYO9AB2RTY4 2548 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 ZNF492Q9P255 531 aa7.19□□□□□ -1.26
COL6A6-201ENST00000358511 TRAV40A0A0B4J280 105 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 VCYO14598 125 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 LGALS9BQ3B8N2 356 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms