RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 LINC01356Q8N9X3 169 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 I3L3M4 83 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 CD59P13987 128 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 SCN8AQ9UQD0 1980 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 IGLL1P15814 213 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 SPRR3Q9UBC9 169 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 H0YJW9 148 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 J3KT08 172 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 STRCP1A6NGW2 1772 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 INTS1Q8N201 2190 aaKnown RBP10.44□□□□□ -0.74
SMC4-202ENST00000357388 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 H3BUX3 64 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 NTN3O00634 580 aaPredicted RBP10.44□□□□□ -0.74
SMC4-202ENST00000357388 IGHV1-8P0DP01 117 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
SMC4-202ENST00000357388 RNASE2P10153 161 aaKnown RBP10.43□□□□□ -0.74
SMC4-202ENST00000357388 SRSF2Q01130 221 aaKnown RBP10.43□□□□□ -0.74
SMC4-202ENST00000357388 Q8TAT8 98 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 TRIP12Q14669 1992 aaPredicted RBP10.43□□□□□ -0.74
SMC4-202ENST00000357388 CRLF1O75462 422 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 NDUFB8O95169 186 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 GATA3P23771 443 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 QRFPP83859 136 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
SMC4-202ENST00000357388 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 NPYP01303 97 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 LCNL1Q6ZST4 164 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 ZCCHC24Q8N2G6 241 aaKnown RBP10.42□□□□□ -0.74
SMC4-202ENST00000357388 MCRIP2Q9BUT9 160 aaKnown RBP10.42□□□□□ -0.74
SMC4-202ENST00000357388 COL18A1P39060 1754 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 RTTNQ86VV8 2226 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 B5MCH6 92 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 RPL35AP18077 110 aaKnown RBP10.42□□□□□ -0.74
SMC4-202ENST00000357388 SS18L2Q9UHA2 77 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 C5orf64Q2M2E5 130 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 C10orf55Q5SWW7 151 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 LINC00527Q9UJ94 153 aa10.42□□□□□ -0.74
SMC4-202ENST00000357388 SNRNP200O75643 2136 aaKnown RBP10.42□□□□□ -0.74
SMC4-202ENST00000357388 E9PQ18 207 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 F8VRH5 84 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 A0A087WV48 116 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 ATOX1O00244 68 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 CRYBA4P53673 196 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 IGLC7A0M8Q6 106 aa10.41□□□□□ -0.74
SMC4-202ENST00000357388 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 VWCEQ96DN2 955 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 PRB3Q04118 309 aaPredicted RBP10.4□□□□□ -0.74
SMC4-202ENST00000357388 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 IGKV1-27A0A075B6S5 117 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 TRAV3A0A0B4J244 114 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 H3BMG7 143 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 K7EMI3 77 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 TMEM200BQ69YZ2 307 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 TMEM219Q86XT9 240 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 V9GYV3 84 aa10.4□□□□□ -0.74
SMC4-202ENST00000357388 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.4□□□□□ -0.75
SMC4-202ENST00000357388 CEP290O15078 2479 aa10.4□□□□□ -0.75
SMC4-202ENST00000357388 TUBGCP6Q96RT7 1819 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 TRBV25-1A0A075B6N4 114 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 CFHR2P36980 270 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 MRPL51Q4U2R6 128 aaKnown RBP10.39□□□□□ -0.75
SMC4-202ENST00000357388 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
SMC4-202ENST00000357388 A0A087WWL8 130 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 MYO16Q9Y6X6 1858 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 TMEM213A2RRL7 107 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 Q6P435 159 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
SMC4-202ENST00000357388 C9JQL5 133 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 TDRD15B5MCY1 1934 aaKnown RBP10.38□□□□□ -0.75
SMC4-202ENST00000357388 H3BQ85 93 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 FOXG1P55316 489 aaPredicted RBP10.38□□□□□ -0.75
SMC4-202ENST00000357388 HERVK_113P63121 156 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 CACNA1GO43497 2377 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 HEATR5BQ9P2D3 2071 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 ANKRD36A6QL64 1941 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 LINC00473A8K010 186 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 TMEM14CQ9P0S9 112 aa10.38□□□□□ -0.75
SMC4-202ENST00000357388 NBL1P41271 181 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 SMIM20Q8N5G0 67 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 CD177Q8N6Q3 437 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 J3QQQ9 107 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 ZNF561-AS1K7EIQ3 104 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 PSPNO60542 156 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 CFC1BP0CG36 223 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 CFC1P0CG37 223 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms