RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 RCHY1Q96PM5 261 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 ORAOV1Q8WV07 137 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 USMG5Q96IX5 58 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 SMIM27A0A1W2PRY6 76 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 NUPR1O60356 82 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 NDUFA3O95167 84 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 IGLV2-14P01704 120 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 EMP1P54849 157 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 C11orf53Q8IXP5 236 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 A0A1W2PPI3 338 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 NCR2O95944 276 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 ODF3L1Q8IXM7 274 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 PIP4P2Q8N4L2 257 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 C11orf52Q96A22 123 aa9.92□□□□□ -0.82
COLCA1-201ENST00000355430 NAA38Q9BRA0 125 aaKnown RBP9.92□□□□□ -0.82
COLCA1-201ENST00000355430 UBE2V1Q13404 147 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
COLCA1-201ENST00000355430 LYZL1Q6UWQ5 148 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 ATP5LO75964 103 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 JKAMPQ9P055 326 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 FABP5P3A8MUU1 101 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 GATA4P43694 442 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 Q86TA4 180 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 SELENOKQ9Y6D0 94 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 NPIPB5A8MRT5 1133 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 IGLC2P0DOY2 106 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 IGLC3P0DOY3 106 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 IFI27L1Q96BM0 104 aa9.91□□□□□ -0.82
COLCA1-201ENST00000355430 NCOA6Q14686 2063 aaPredicted RBP9.91□□□□□ -0.82
COLCA1-201ENST00000355430 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 DAZAP2Q15038 168 aaPredicted RBP9.9□□□□□ -0.82
COLCA1-201ENST00000355430 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.82
COLCA1-201ENST00000355430 RUSC1-AS1Q66K80 236 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 ARL6IP6Q8N6S5 226 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 A0A1B0GWJ7 208 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 MMP23AO75900 390 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 MRPS16Q9Y3D3 137 aaKnown RBP9.9□□□□□ -0.82
COLCA1-201ENST00000355430 TTC9CQ8N5M4 171 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 SIGLEC9Q9Y336 463 aa9.9□□□□□ -0.82
COLCA1-201ENST00000355430 ADORA2A-AS1P86434 159 aa9.9□□□□□ -0.83
COLCA1-201ENST00000355430 C5orf30Q96GV9 206 aa9.9□□□□□ -0.83
COLCA1-201ENST00000355430 SCGB3A1Q96QR1 104 aa9.9□□□□□ -0.83
COLCA1-201ENST00000355430 SLC50A1Q9BRV3 221 aa9.9□□□□□ -0.83
COLCA1-201ENST00000355430 COX11Q9Y6N1 276 aa9.9□□□□□ -0.83
COLCA1-201ENST00000355430 CFHR2P36980 270 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 IGLV1-44P01699 117 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 RIPPLY3P57055 190 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PRR20EP86478 221 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PRR20CP86479 221 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PRR20DP86480 221 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PRR20BP86481 221 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PRR20AP86496 221 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 GUSBP1Q15486 140 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 BDP1A6H8Y1 2624 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PAX1P15863 534 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 SSBP2P81877 361 aaPredicted RBP9.89□□□□□ -0.83
COLCA1-201ENST00000355430 FAM71F2Q6NXP2 309 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 ZNF833PQ6ZTB9 187 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 PSG3Q16557 428 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
COLCA1-201ENST00000355430 FAM223BA6NKX1 122 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 SRRM4A7MD48 611 aaKnown RBP9.89□□□□□ -0.83
COLCA1-201ENST00000355430 SH2D1AO60880 128 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 CNTFRP26992 372 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 SEC11AP67812 179 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 TMEM249Q2WGJ8 235 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 FAM223AQ8IWN6 122 aa9.89□□□□□ -0.83
COLCA1-201ENST00000355430 TMEM262E9PQX1 116 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 H7C1H1 209 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 GRNP28799 593 aaKnown RBP9.88□□□□□ -0.83
COLCA1-201ENST00000355430 ZNF56Q15929 161 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 SPRY4Q9C004 299 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 KIR2DL5BA0A0G2JN68 375 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 KIR2DL5BA0A0G2JPC4 375 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 A0A1W2PNU3 283 aaPredicted RBP9.88□□□□□ -0.83
COLCA1-201ENST00000355430 ARMS2P0C7Q2 107 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 HSD52Q0P140 79 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 KIR2DL5AQ8N109 375 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 SPTAN1Q13813 2472 aaKnown RBP9.88□□□□□ -0.83
COLCA1-201ENST00000355430 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
COLCA1-201ENST00000355430 ASIPP42127 132 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 Q8TAT8 98 aa9.88□□□□□ -0.83
COLCA1-201ENST00000355430 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 AKAP6Q13023 2319 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 IGFL4Q6B9Z1 124 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 FAM110DQ8TAY7 271 aaPredicted RBP9.87□□□□□ -0.83
COLCA1-201ENST00000355430 GFRA4Q9GZZ7 299 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms