RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 INSP01308 110 aa13.19□□□□□ -0.3
SHTN1-202ENST00000355371 LOXP28300 417 aaPredicted RBP13.19□□□□□ -0.3
SHTN1-202ENST00000355371 ZNRD1Q9P1U0 126 aa13.19□□□□□ -0.3
SHTN1-202ENST00000355371 PAX2Q02962 417 aa13.18□□□□□ -0.3
SHTN1-202ENST00000355371 C15orf65H3BRN8 121 aa13.18□□□□□ -0.3
SHTN1-202ENST00000355371 SLC25A20O43772 301 aa13.18□□□□□ -0.3
SHTN1-202ENST00000355371 RNF166Q96A37 237 aaPredicted RBP13.18□□□□□ -0.3
SHTN1-202ENST00000355371 FNDC4Q9H6D8 234 aaPredicted RBP13.18□□□□□ -0.3
SHTN1-202ENST00000355371 CT83Q5H943 113 aa13.18□□□□□ -0.3
SHTN1-202ENST00000355371 IGHV2-70DA0A0C4DH43 119 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 A6NNC1 897 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 IGKV1-39P01597 117 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 IGKV1D-39P04432 117 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 KLHL30-AS1Q8NEE0 82 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 LIME1Q9H400 295 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 MPDZO75970 2070 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 ATP6V0E1O15342 81 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 TMEM86BQ8N661 226 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 NCOR1O75376 2440 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 SYS1-DBNDD2H3BUS1 97 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 OVOL3O00110 214 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 PCP4P48539 62 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 TEX43Q6ZNM6 134 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
SHTN1-202ENST00000355371 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 TMEM249Q2WGJ8 235 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 SSC4DQ8WTU2 575 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 C14orf178Q8N769 122 aaPredicted RBP13.16□□□□□ -0.3
SHTN1-202ENST00000355371 LRRK1Q38SD2 2015 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.16□□□□□ -0.3
SHTN1-202ENST00000355371 Q0VG73 95 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 CSTL1Q9H114 145 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 FAM215AQ9Y5M1 114 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 SELENOKQ9Y6D0 94 aa13.16□□□□□ -0.3
SHTN1-202ENST00000355371 LINC00479Q96M42 142 aa13.15□□□□□ -0.3
SHTN1-202ENST00000355371 C9JQL5 133 aa13.15□□□□□ -0.3
SHTN1-202ENST00000355371 IGHV4-39P01824 125 aa13.15□□□□□ -0.3
SHTN1-202ENST00000355371 GUSBP1Q15486 140 aa13.15□□□□□ -0.3
SHTN1-202ENST00000355371 AMN1Q8IY45 258 aa13.15□□□□□ -0.3
SHTN1-202ENST00000355371 TRBV19A0A075B6N1 114 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 MRPL52Q86TS9 123 aaKnown RBP13.14□□□□□ -0.31
SHTN1-202ENST00000355371 FRMPD3Q5JV73 1810 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
SHTN1-202ENST00000355371 PHF3Q92576 2039 aaKnown RBP13.14□□□□□ -0.31
SHTN1-202ENST00000355371 A0A1B0GV72 72 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 TMEM158Q8WZ71 300 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 LSM4Q9Y4Z0 139 aaKnown RBP13.14□□□□□ -0.31
SHTN1-202ENST00000355371 ERCC8Q13216 396 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 SP5Q6BEB4 398 aaPredicted RBP13.14□□□□□ -0.31
SHTN1-202ENST00000355371 ANAPC1Q9H1A4 1944 aa13.14□□□□□ -0.31
SHTN1-202ENST00000355371 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 PYY3Q5JQD4 70 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 RASL10AQ92737 203 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 TMEM14CQ9P0S9 112 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 KAAG1Q9UBP8 84 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 TRAV8-2A0A0B4J237 113 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 DUX4L9Q6RFH8 374 aaPredicted RBP13.13□□□□□ -0.31
SHTN1-202ENST00000355371 DMRTC2Q8IXT2 367 aaPredicted RBP13.13□□□□□ -0.31
SHTN1-202ENST00000355371 Q8NFD4 153 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 SPOCK3Q9BQ16 436 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 PI4KAP42356 2102 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 A0A087WX48 190 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 M0R2P5 195 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 RNF114Q9Y508 228 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 IL17RELQ6ZVW7 336 aa13.13□□□□□ -0.31
SHTN1-202ENST00000355371 IGHV3-64A0A075B6Q5 118 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
SHTN1-202ENST00000355371 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 ACACAQ13085 2346 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 KIAA1671Q9BY89 1806 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 PRSS46E5RG02 174 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 LINC00158P58513 81 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 RNF138Q8WVD3 245 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 A8MWV9 139 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 NBL1P41271 181 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
SHTN1-202ENST00000355371 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
SHTN1-202ENST00000355371 FANCMQ8IYD8 2048 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 hDV102S1A0JD36 115 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 FXYD7P58549 80 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 ZNF726P1Q15940 193 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 VGLL1Q99990 258 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 PGPEP1Q9NXJ5 209 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 POU2AF1Q16633 256 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 RNF223E7ERA6 249 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 FAM231DQ6ZW35 169 aa13.11□□□□□ -0.31
SHTN1-202ENST00000355371 TNFRSF6BO95407 300 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms