RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 ATP6V0E2Q8NHE4 81 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 SMKR1H3BMG3 65 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 NPYP01303 97 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
CD46-203ENST00000354848 GAGE5Q13069 117 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 GAGE6Q13070 117 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 KLF17Q5JT82 389 aaPredicted RBP6.24□□□□□ -1.41
CD46-203ENST00000354848 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 HES7Q9BYE0 225 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 OTORQ9NRC9 128 aa6.24□□□□□ -1.41
CD46-203ENST00000354848 CGB1A6NKQ9 187 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 SRRM5B3KS81 715 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 INS-IGF2F8WCM5 200 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 CRIP1P50238 77 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 TAL2Q16559 108 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 FAM169BQ8N8A8 192 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 MAPKAPK5-AS1Q8N8E1 139 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 ZNRD1Q9P1U0 126 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 SSUH2Q9Y2M2 353 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 B5MCH6 92 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 PRB4P10163 310 aaPredicted RBP6.23□□□□□ -1.41
CD46-203ENST00000354848 CCL4P13236 92 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 C10orf55Q5SWW7 151 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 LYZL1Q6UWQ5 148 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 LCNL1Q6ZST4 164 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 CEP290O15078 2479 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 PRSS1P07477 247 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 HARBI1Q96MB7 349 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 FAM173AQ9BQD7 235 aa6.23□□□□□ -1.41
CD46-203ENST00000354848 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 HLA-DRB4P13762 266 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 CKS2P33552 79 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 SUB1P53999 127 aaKnown RBP eCLIP6.22□□□□□ -1.413e-6■□□□□ 8.1
CD46-203ENST00000354848 Q6ZS92 163 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 TTTY12Q9BZ98 90 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 RALYQ9UKM9 306 aaKnown RBP6.22□□□□□ -1.41
CD46-203ENST00000354848 UFC1Q9Y3C8 167 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 HLA-DRB4X5D2U9 266 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 INTS1Q8N201 2190 aaKnown RBP6.22□□□□□ -1.41
CD46-203ENST00000354848 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 LYZL6O75951 148 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 FCER1GP30273 86 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 C8orf46Q8TAG6 207 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 FOXC2Q99958 501 aa6.22□□□□□ -1.41
CD46-203ENST00000354848 TMSB15BA0A087X1C1 80 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 TRBV7-9A0A0J9YWB2 115 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 TMEM8BA6NDV4 472 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 DPM2O94777 84 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 IGHV1-2P23083 117 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 LEPP41159 167 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 HERV-K104P63124 156 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 MORN3Q6PF18 240 aaPredicted RBP6.21□□□□□ -1.41
CD46-203ENST00000354848 TMEM75Q8N9X5 138 aa6.21□□□□□ -1.41
CD46-203ENST00000354848 ZNF71Q9NQZ8 489 aaPredicted RBP6.21□□□□□ -1.41
CD46-203ENST00000354848 MRPS17Q9Y2R5 130 aaKnown RBP6.21□□□□□ -1.41
CD46-203ENST00000354848 RAI1Q7Z5J4 1906 aaPredicted RBP6.21□□□□□ -1.42
CD46-203ENST00000354848 RBP4P02753 201 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 TRGV9Q99603 122 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 RAB9BQ9NP90 201 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 TRAV40A0A0B4J280 105 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 TNFRSF1AP19438 455 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 TWIST1Q15672 202 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 PTH2Q96A98 100 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 FAM110AQ9BQ89 295 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 TMEM160Q9NX00 188 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 URB1O60287 2271 aaKnown RBP6.21□□□□□ -1.42
CD46-203ENST00000354848 ABCA1O95477 2261 aa6.21□□□□□ -1.42
CD46-203ENST00000354848 CRYGCP07315 174 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 PEAR1Q5VY43 1037 aaPredicted RBP6.2□□□□□ -1.42
CD46-203ENST00000354848 DUX4L9Q6RFH8 374 aaPredicted RBP6.2□□□□□ -1.42
CD46-203ENST00000354848 TMEM158Q8WZ71 300 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 DLX4Q92988 240 aaPredicted RBP6.2□□□□□ -1.42
CD46-203ENST00000354848 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 MRPL20Q9BYC9 149 aaKnown RBP6.2□□□□□ -1.42
CD46-203ENST00000354848 FAM90A27PA6NNH2 459 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 NHLRC4P0CG21 123 aaPredicted RBP6.2□□□□□ -1.42
CD46-203ENST00000354848 SPRNQ5BIV9 151 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 ZFAND6Q6FIF0 208 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 OR10X1Q8NGY0 326 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 IGHV3-21A0A0B4J1V1 117 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 HOXA3O43365 443 aaPredicted RBP6.2□□□□□ -1.42
CD46-203ENST00000354848 MEOX1P50221 254 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 FAM201AQ5SY85 155 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 HCP5Q6MZN7 132 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 TMEM167AQ8TBQ9 72 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 C17orf77Q96MU5 243 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 MAP1LC3AQ9H492 121 aa6.2□□□□□ -1.42
CD46-203ENST00000354848 A0A1W2PPI3 338 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 LINC01548A6NM66 108 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 ATP5LO75964 103 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 GAS8-AS1O95177 125 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 THBDP07204 575 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms