RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 LAGE3Q14657 143 aa4.13□□□□□ -1.75
CKAP5-202ENST00000354558 TREML4Q6UXN2 200 aa4.13□□□□□ -1.75
CKAP5-202ENST00000354558 FAM19A2Q8N3H0 131 aa4.13□□□□□ -1.75
CKAP5-202ENST00000354558 Q8TAT8 98 aa4.13□□□□□ -1.75
CKAP5-202ENST00000354558 PSME4Q14997 1843 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 IGLV10-54A0A075B6I4 117 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 MYMXA0A1B0GTQ4 84 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 SCO2A0A1W2PP80 73 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 J3QL48 77 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 LINC00614P0C842 121 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.12□□□□□ -1.75
CKAP5-202ENST00000354558 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 DAZAP2Q15038 168 aaPredicted RBP4.12□□□□□ -1.75
CKAP5-202ENST00000354558 MSRB3Q8IXL7 192 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 EXOC3-AS1Q8N2X6 119 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 GATA6Q92908 595 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 COQ2Q96H96 371 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 LINC00479Q96M42 142 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 C17orf77Q96MU5 243 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 PRO1933Q9H354 126 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 IGHV7-4-1A0A0J9YVY3 117 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 HMSDA8MTL9 139 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 NFE4Q86UQ8 179 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 SLX1AQ9BQ83 275 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 EPDR1Q9UM22 224 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 U3KQE9 123 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 MYO7AQ13402 2215 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 PDE4DIPQ5VU43 2346 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 OVOL2Q9BRP0 275 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 SPXQ9BT56 116 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 RALGAPA1Q6GYQ0 2036 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 STAG3L3P0CL85 134 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 RPL23P62829 140 aaKnown RBP4.12□□□□□ -1.75
CKAP5-202ENST00000354558 AWAT1Q58HT5 328 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 DEFB125Q8N687 156 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 DNAJC30Q96LL9 226 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 IL36BQ9NZH7 164 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 U3KQK5 164 aa4.12□□□□□ -1.75
CKAP5-202ENST00000354558 A0A087WZ39 114 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 SH2D1AO60880 128 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 ATXN8Q156A1 80 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 PLEKHB2Q96CS7 222 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 LY96Q9Y6Y9 160 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 SLC17A3O00476 420 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 CRYGDP07320 174 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 IGHV4-31P0DP07 118 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 FOXI2Q6ZQN5 318 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 FNDC1Q4ZHG4 1894 aaPredicted RBP4.11□□□□□ -1.75
CKAP5-202ENST00000354558 PGPEP1LA6NFU8 196 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 FGF16O43320 207 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 NDUFB1O75438 58 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 IGF1P05019 195 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 SMIM6P0DI80 62 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 P0DMU3 169 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 FAM231AP0DMU4 169 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 FAM231CP0DMU5 169 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 PMCHL2Q9BQD1 86 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 TIMM21Q9BVV7 248 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 FRMPD3Q5JV73 1810 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 IGLV3-32A0A0A0MS00 114 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 SHISA9B4DS77 424 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 UBE2CO00762 179 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 INAFM2P0DMQ5 153 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 DUTP33316 252 aaKnown RBP4.11□□□□□ -1.75
CKAP5-202ENST00000354558 HGFACQ04756 655 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 ATP6V0E2Q8NHE4 81 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 ZNF479Q96JC4 524 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 TMEM238C9JI98 176 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 H3BUA1 57 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 SEC61GP60059 68 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 ZNF562Q6V9R5 426 aa4.11□□□□□ -1.75
CKAP5-202ENST00000354558 I3L3M4 83 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 BCL6BQ8N143 479 aaPredicted RBP4.1□□□□□ -1.75
CKAP5-202ENST00000354558 IGHV4OR15-8A0A075B7B6 117 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 A0A087WW49 117 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 PRR20EP86478 221 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 PRR20CP86479 221 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 PRR20DP86480 221 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 PRR20BP86481 221 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 PRR20AP86496 221 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.1□□□□□ -1.75
CKAP5-202ENST00000354558 IGKV1-6A0A0C4DH72 117 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 C5orf63A6NC05 138 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 SFTA2Q6UW10 78 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 KIAA1671Q9BY89 1806 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 IGKV1D-17A0A075B6S4 117 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 TRBV5-5A0A0J9YX44 114 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 A0A1B0GTI1 187 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 FAM90A9PA6NNJ1 464 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 DPM2O94777 84 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 XAF1Q6GPH4 301 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 ATOH7Q8N100 152 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 LIME1Q9H400 295 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 BRCA1P38398 1863 aaKnown RBP4.1□□□□□ -1.75
CKAP5-202ENST00000354558 Q0VG73 95 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 ZFAND2BQ8WV99 257 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 TMEM170AQ8WVE7 144 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 TRGV9Q99603 122 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 WFDC6Q9BQY6 131 aa4.1□□□□□ -1.75
CKAP5-202ENST00000354558 UNC13CQ8NB66 2214 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms