RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 HES1Q14469 280 aa17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 ATRXP46100 2492 aa17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 LOC105371242A0A075B767 164 aa17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 OVOL3O00110 214 aa17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 CRXO43186 299 aaPredicted RBP17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 KLF17Q5JT82 389 aaPredicted RBP17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 DMRTA1Q5VZB9 504 aa17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 CYB5R2Q6BCY4 276 aa17.31■□□□□ 0.36
NKX2-4-201ENST00000351817 NPIPB5A8MRT5 1133 aa17.3■□□□□ 0.36
NKX2-4-201ENST00000351817 MFAP4P55083 255 aa17.3■□□□□ 0.36
NKX2-4-201ENST00000351817 RIGQ13278 110 aa17.3■□□□□ 0.36
NKX2-4-201ENST00000351817 ZNF48Q96MX3 618 aaPredicted RBP17.3■□□□□ 0.36
NKX2-4-201ENST00000351817 MRPS16Q9Y3D3 137 aaKnown RBP17.3■□□□□ 0.36
NKX2-4-201ENST00000351817 IGLV11-55A0A075B6I3 123 aa17.29■□□□□ 0.36
NKX2-4-201ENST00000351817 TSPOP30536 169 aa17.29■□□□□ 0.36
NKX2-4-201ENST00000351817 SPATA12Q7Z6I5 190 aa17.29■□□□□ 0.36
NKX2-4-201ENST00000351817 LEPROTL1O95214 131 aa17.29■□□□□ 0.36
NKX2-4-201ENST00000351817 PDE6HQ13956 83 aa17.29■□□□□ 0.36
NKX2-4-201ENST00000351817 FANCD2OSQ96PS1 177 aa17.29■□□□□ 0.36
NKX2-4-201ENST00000351817 OR5AL1P0C617 328 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 IGLL1P15814 213 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 GATD1Q8NB37 220 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 GOLT1BQ9Y3E0 138 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 S4R3C0 116 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 A0A1B0GW15 77 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 TFPI2P48307 235 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 ZNF562Q6V9R5 426 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 IGFBPL1Q8WX77 278 aa17.28■□□□□ 0.36
NKX2-4-201ENST00000351817 SYS1-DBNDD2H3BUS1 97 aa17.27■□□□□ 0.36
NKX2-4-201ENST00000351817 ARMS2P0C7Q2 107 aa17.27■□□□□ 0.36
NKX2-4-201ENST00000351817 STPG4Q8N801 248 aa17.27■□□□□ 0.36
NKX2-4-201ENST00000351817 NEU4Q8WWR8 484 aaPredicted RBP17.27■□□□□ 0.36
NKX2-4-201ENST00000351817 ARPC1AQ92747 370 aa17.27■□□□□ 0.36
NKX2-4-201ENST00000351817 AAMDCQ9H7C9 122 aa17.27■□□□□ 0.36
NKX2-4-201ENST00000351817 Q6AWC8 147 aa17.27■□□□□ 0.35
NKX2-4-201ENST00000351817 ARHGAP32A7KAX9 2087 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 A0A1W2PRD5 423 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 A0A1W2PRF3 423 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 A0A1W2PRM7 423 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 OR4C46A6NHA9 309 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 FBLN7Q53RD9 439 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 CCDC144NLQ6NUI1 221 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 TTC9CQ8N5M4 171 aa17.26■□□□□ 0.35
NKX2-4-201ENST00000351817 TPRP12270 2363 aaKnown RBP17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 M0R3E3 92 aa17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 CRIP1P50238 77 aa17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 C11orf71Q6IPW1 123 aa17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 ASCL2Q99929 193 aa17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 ANKHD1Q8IWZ3 2542 aaKnown RBP17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 CT45A10P0DMU9 189 aa17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 LINC00173Q6ZV60 143 aa17.25■□□□□ 0.35
NKX2-4-201ENST00000351817 SERTM2A0A1B0GWG4 89 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 C1orf122Q6ZSJ8 110 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 BCL6BQ8N143 479 aaPredicted RBP17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 C21orf62Q9NYP8 219 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 OOSP1A8MZH6 123 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 F8W735 103 aaPredicted RBP17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 NPSP0C0P6 89 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 CSN1S1P47710 185 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 THYN1Q9P016 225 aa17.24■□□□□ 0.35
NKX2-4-201ENST00000351817 NBASA2RRP1 2371 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 NCBP2LA6PVI3 153 aaKnown RBP17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 PSG9Q00887 426 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 LY6DQ14210 128 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 NDPQ00604 133 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 VMO1Q7Z5L0 202 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 Q8N6K4 173 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 C8orf49Q96NF6 230 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 MAP1LC3CQ9BXW4 147 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 TMEM191AQ9H0A3 160 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 ST20Q9HBF5 79 aa17.23■□□□□ 0.35
NKX2-4-201ENST00000351817 ZNF138P52744 262 aa17.22■□□□□ 0.35
NKX2-4-201ENST00000351817 TMUB1Q9BVT8 246 aa17.22■□□□□ 0.35
NKX2-4-201ENST00000351817 HSPB8Q9UJY1 196 aa17.22■□□□□ 0.35
NKX2-4-201ENST00000351817 PRB4P10163 310 aaPredicted RBP17.21■□□□□ 0.35
NKX2-4-201ENST00000351817 PET117Q6UWS5 81 aa17.21■□□□□ 0.35
NKX2-4-201ENST00000351817 DYNAPQ8N1N2 210 aa17.21■□□□□ 0.35
NKX2-4-201ENST00000351817 ABCA4P78363 2273 aa17.21■□□□□ 0.35
NKX2-4-201ENST00000351817 EBI3Q14213 229 aa17.21■□□□□ 0.35
NKX2-4-201ENST00000351817 SCGB2A1O75556 95 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 NDUFB8O95169 186 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 CSN3P07498 182 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 RPL7P18124 248 aaKnown RBP17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 HINT1P49773 126 aaPredicted RBP17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 MINOS1Q5TGZ0 78 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 PRORYQ9H606 182 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 MINOS1-NBL1R4GNA1 71 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 CHD8Q9HCK8 2581 aa17.2■□□□□ 0.34
NKX2-4-201ENST00000351817 ZNF493Q6ZR52 646 aa17.19■□□□□ 0.34
NKX2-4-201ENST00000351817 TPPP3Q9BW30 176 aa17.19■□□□□ 0.34
NKX2-4-201ENST00000351817 COL6A6A6NMZ7 2263 aa17.19■□□□□ 0.34
NKX2-4-201ENST00000351817 AP5S1Q9NUS5 200 aa17.19■□□□□ 0.34
NKX2-4-201ENST00000351817 TMEM189A5PLL7 270 aa17.18■□□□□ 0.34
NKX2-4-201ENST00000351817 COX8CQ7Z4L0 72 aa17.18■□□□□ 0.34
NKX2-4-201ENST00000351817 NCOR2Q9Y618 2525 aa17.18■□□□□ 0.34
NKX2-4-201ENST00000351817 LRBAP50851 2863 aa17.17■□□□□ 0.34
NKX2-4-201ENST00000351817 FBLL1A6NHQ2 334 aaKnown RBP17.17■□□□□ 0.34
NKX2-4-201ENST00000351817 TMEM11P17152 192 aa17.17■□□□□ 0.34
NKX2-4-201ENST00000351817 SAPCD1Q5SSQ6 148 aa17.17■□□□□ 0.34
NKX2-4-201ENST00000351817 OR2T8A6NH00 312 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms