RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RIGQ13278 110 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 IGFL4Q6B9Z1 124 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 MRPL20Q9BYC9 149 aaKnown RBP12.13□□□□□ -0.47
PTBP1-201ENST00000349038 NOTCH3Q9UM47 2321 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 APOMO95445 188 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 WT1-ASQ06250 92 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 RNFT1Q5M7Z0 435 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 ZC2HC1BQ5TFG8 222 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 SPRY4Q9C004 299 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 TPSG1Q9NRR2 321 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 RALYQ9UKM9 306 aaKnown RBP12.12□□□□□ -0.47
PTBP1-201ENST00000349038 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 SVEP1Q4LDE5 3571 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 DSCAMO60469 2012 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 IGHV3-35A0A0C4DH35 117 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 IGHV1-2P23083 117 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 MEOX1P50221 254 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
PTBP1-201ENST00000349038 MALRD1Q5VYJ5 2156 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 NDUFA3O95167 84 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 CCL3L1P16619 93 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 ATP1A1-AS1Q5TC04 95 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 LYZL1Q6UWQ5 148 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
PTBP1-201ENST00000349038 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 MT-ATP8P03928 68 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 TMEM75Q8N9X5 138 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
PTBP1-201ENST00000349038 B5MCH6 92 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 C9orf172C9J069 976 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
PTBP1-201ENST00000349038 OR4X2Q8NGF9 303 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 TMEM178AQ8NBL3 297 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 OR1L8Q8NGR8 309 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 DDB2Q92466 427 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 SPANXB1Q9NS25 103 aaPredicted RBP12.1□□□□□ -0.47
PTBP1-201ENST00000349038 CREBBPQ92793 2442 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 TCRBV4S1A1TA0A5B7 111 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 RNF183Q96D59 192 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
PTBP1-201ENST00000349038 PTPRZ1P23471 2315 aaPredicted RBP12.09□□□□□ -0.47
PTBP1-201ENST00000349038 DMXL1Q9Y485 3027 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 NPYP01303 97 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 HBDP02042 147 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 LEPP41159 167 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 GCSAMQ8N6F7 178 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 OR9G4Q8NGQ1 327 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 OR10X1Q8NGY0 326 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 PLSCR4Q9NRQ2 329 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 SPRR3Q9UBC9 169 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 A0A096LNJ9 63 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 TRAV40A0A0B4J280 105 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 KIR2DS2P43631 304 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
PTBP1-201ENST00000349038 PSMB2P49721 201 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 CR1LQ2VPA4 569 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 MDS2Q8NDY4 140 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 TRBV25-1A0A075B6N4 114 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 NDUFS7O75251 213 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 CECR9P0C854 216 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 RPRMLQ8N4K4 120 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 C3orf56Q8N813 242 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 Q8TAT8 98 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 PRRG2O14669 202 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
PTBP1-201ENST00000349038 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 SMIM17P0DL12 118 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 Q86TA4 180 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 ORMDL3Q8N138 153 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 C2orf83Q53S99 150 aa12.07□□□□□ -0.48
PTBP1-201ENST00000349038 ZNF48Q96MX3 618 aaPredicted RBP12.07□□□□□ -0.48
PTBP1-201ENST00000349038 ACACAQ13085 2346 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 NPIPB5A8MRT5 1133 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 H7C2G1 150 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 KLRC4-KLRK1H3BQV0 150 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 M0R1B8 84 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 ORM1P02763 201 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 CCL8P80075 99 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 C17orf58Q2M2W7 97 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 RITA1Q96K30 269 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 CGB1A6NKQ9 187 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 IGLL5B9A064 214 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 C16orf97H3BN30 126 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 FMC1Q96HJ9 113 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 ANAPC13Q9BS18 74 aa12.06□□□□□ -0.48
PTBP1-201ENST00000349038 ZZEF1O43149 2961 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 TRGV5A0A0B4J1U4 118 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 LINC01548A6NM66 108 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 FAM90A27PA6NNH2 459 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms