RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ORM2P19652 201 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 PVRIGQ6DKI7 326 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 SH2D6Q7Z4S9 175 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 ORMDL3Q8N138 153 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 OR10X1Q8NGY0 326 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 ARPC1AQ92747 370 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 ZNF479Q96JC4 524 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 HARBI1Q96MB7 349 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 NHP2Q9NX24 153 aaKnown RBP8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 DKK2Q9UBU2 259 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 SSUH2Q9Y2M2 353 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 A6NJY4 79 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 HES3Q5TGS1 186 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 FAM104BQ5XKR9 115 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 Q6ZS92 163 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 PRNTQ86SH4 94 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 LINC00311Q8N616 119 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 OR4C13Q8NGP0 309 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 RND1Q92730 232 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 IGKV2D-26A0A0A0MRZ7 120 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 CGB1A6NKQ9 187 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 OR11H12B2RN74 326 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 SPRY3O43610 288 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 CRYGCP07315 174 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 EVI2AP22794 236 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 TNFAIP6P98066 277 aaPredicted RBP8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 LINC01559Q495D7 138 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 C8orf86Q6ZUL3 223 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 OR11H1Q8NG94 326 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 OR11H2Q8NH07 326 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 ATP6V0E2Q8NHE4 81 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 TMEM14CQ9P0S9 112 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 HHLA3Q9XRX5 114 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 CYSLTR1Q9Y271 337 aa8.19□□□□□ -1.1
CHRNA1-202ENST00000348749 E7EUB6 86 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 H3BMG7 143 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 M0R1B8 84 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 KLRD1Q13241 179 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 LPAL2Q16609 132 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 ATP1A1-AS1Q5TC04 95 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 GOLT1AQ6ZVE7 132 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 C8orf46Q8TAG6 207 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 TNCP24821 2201 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 CFAP54Q96N23 3096 aa8.18□□□□□ -1.1
CHRNA1-202ENST00000348749 INTS1Q8N201 2190 aaKnown RBP8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 CDX4O14627 284 aaPredicted RBP8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 IGHV1-46P01743 117 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 ATP5G2Q06055 141 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 ODF1Q14990 250 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 ZNF562Q6V9R5 426 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 MRPL20Q9BYC9 149 aaKnown RBP8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 CACNA1AO00555 2505 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 KNTC1P50748 2209 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 NPIPB5A8MRT5 1133 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 C16orf97H3BN30 126 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 IGHV3-48P01763 117 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 C12orf74Q32Q52 190 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 VMA21Q3ZAQ7 101 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 MRPL51Q4U2R6 128 aaKnown RBP8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 Q71RC1 249 aaPredicted RBP8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 CCL13Q99616 98 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
CHRNA1-202ENST00000348749 PCNX2A6NKB5 2137 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 SERTM2A0A1B0GWG4 89 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 TNFRSF1AP19438 455 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 INSL3P51460 131 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 RRN3P1Q2M238 152 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 AMN1Q8IY45 258 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 NUP37Q8NFH4 326 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 FDCSPQ8NFU4 85 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 C1QTNF4Q9BXJ3 329 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 PRR14LQ5THK1 2151 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 TECTAO75443 2155 aa8.16□□□□□ -1.1
CHRNA1-202ENST00000348749 WDFY3Q8IZQ1 3526 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 A0A1B0GWB2 263 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 H3BTX0 84 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 IGKCP01834 107 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 CCL11P51671 97 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 FXYD7P58549 80 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 FOXI1Q12951 378 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 KLF17Q5JT82 389 aaPredicted RBP8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 FAM216BQ8N7L0 139 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 PRSS33Q8NF86 280 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 C20orf78Q9BR46 151 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 HIGD1AQ9Y241 93 aa8.15□□□□□ -1.1
CHRNA1-202ENST00000348749 ZNF318Q5VUA4 2279 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms