RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 NBR2O15453 112 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 SRD5A1P18405 259 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 LGALS9CQ6DKI2 356 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 RTTNQ86VV8 2226 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 H7C1H1 209 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 IGHV1-46P01743 117 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 SPTBN2O15020 2390 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 E9PLN8 166 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 PAQR4Q8N4S7 273 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 TMEM133Q9H2Q1 129 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 UQCRQO14949 82 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 NPYP01303 97 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 HERVK_113P63121 156 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 LAGE3Q14657 143 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 ZC2HC1BQ5TFG8 222 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 HEATR5BQ9P2D3 2071 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 DENND4AQ7Z401 1863 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 SUPT4H1P63272 117 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 ORMDL2Q53FV1 153 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 ZNF497Q6ZNH5 498 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 COL4A6Q14031 1691 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 ID3Q02535 119 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 GGNQ86UU5 652 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 TMEM219Q86XT9 240 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 RETNQ9HD89 108 aa9.07□□□□□ -0.96
SMARCE1-202ENST00000348513 FAM90A1Q86YD7 464 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 MYMXA0A1B0GTQ4 84 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 TIMM23O14925 209 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 ZC2HC1AQ96GY0 325 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 Q9H3A6 140 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 IGLV3-32A0A0A0MS00 114 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 RALGAPA1Q6GYQ0 2036 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 A0A0A6YYD4 124 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 D6R8Y8 96 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 SLC25A48Q6ZT89 311 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 ARHGEF17Q96PE2 2063 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 UPK2O00526 184 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 VPREB3Q9UKI3 123 aa9.06□□□□□ -0.96
SMARCE1-202ENST00000348513 DOCK6Q96HP0 2047 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 VOPP1Q96AW1 172 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 GBF1Q92538 1859 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 F2Z2F3 143 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 NCR2O95944 276 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 TMEM190Q8WZ59 177 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 ESPL1Q14674 2120 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 VWC2LB2RUY7 222 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 HGFACQ04756 655 aa9.05□□□□□ -0.96
SMARCE1-202ENST00000348513 IFI27P40305 119 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 ZNF672Q499Z4 452 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 A0A1B0GX51 115 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 HLA-DMBP28068 263 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 ANK1P16157 1881 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 CEP250Q9BV73 2442 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 NDUFA7O95182 113 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 C3orf36Q3SXR2 165 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 PRSS22Q9GZN4 317 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 TCRBV4S1A1TA0A5B7 111 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 ZNF138P52744 262 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 PEMTQ9UBM1 199 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 EP300Q09472 2414 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-202ENST00000348513 IGKV3D-20A0A0C4DH25 116 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 A0A0G2JNJ9 132 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 NUPR1O60356 82 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 PYYP10082 97 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 STHQ8IWL8 128 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 Q9UFV3 132 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 C15orf61A6NNL5 157 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 C5orf24Q7Z6I8 188 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 SSC4DQ8WTU2 575 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 FGF6P10767 208 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 FXYD7P58549 80 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 LY6HO94772 140 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 LHFPL1Q86WI0 220 aa9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 RPP25LQ8N5L8 163 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-202ENST00000348513 C5orf63A6NC05 138 aa9.02□□□□□ -0.96
SMARCE1-202ENST00000348513 CLPSP04118 112 aa9.02□□□□□ -0.96
SMARCE1-202ENST00000348513 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.96
SMARCE1-202ENST00000348513 C20orf78Q9BR46 151 aa9.02□□□□□ -0.96
SMARCE1-202ENST00000348513 TOMM7Q9P0U1 55 aa9.02□□□□□ -0.96
SMARCE1-202ENST00000348513 H0YJW9 148 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 CD7P09564 240 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms