RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
CACNA1C-204ENST00000347598 SHISA3A0PJX4 238 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 IGLV3-32A0A0A0MS00 114 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 IGKV1-39P01597 117 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 IGKV1D-39P04432 117 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 IGHV1-69DA0A0B4J2H0 117 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 C9orf153Q5TBE3 101 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 CFHR2P36980 270 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
CACNA1C-204ENST00000347598 PRB1P04280 392 aa9.65□□□□□ -0.87
CACNA1C-204ENST00000347598 AGMATQ9BSE5 352 aa9.65□□□□□ -0.87
CACNA1C-204ENST00000347598 NDUFAF3Q9BU61 184 aa9.65□□□□□ -0.87
CACNA1C-204ENST00000347598 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 RHODO00212 210 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 IGLV2-23P01705 113 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 GAS1P54826 345 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 KIR3DS1Q14943 382 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 IGHG4P01861 327 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 GLRX5Q86SX6 157 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 VWCEQ96DN2 955 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 MESP1Q9BRJ9 268 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 FBLN5Q9UBX5 448 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 A0A087WV48 116 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 PRR30Q53SZ7 412 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 TMEM141Q96I45 108 aa9.64□□□□□ -0.87
CACNA1C-204ENST00000347598 ID3Q02535 119 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 ARID1AO14497 2285 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 F5P12259 2224 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 IGKV1-12A0A0C4DH73 117 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 IGKV1D-12P01611 117 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 SPTBP11277 2137 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 TNS1Q9HBL0 1735 aaKnown RBP9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 ADAMTS7Q9UKP4 1686 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HLA-DRB4P13762 266 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HLA-DRB4X5D2U9 266 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 NTF4P34130 210 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 CRYGSP22914 178 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 UBE2E1P51965 193 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 LINC00205P59089 165 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 HGFACQ04756 655 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 NEUROG3Q9Y4Z2 214 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 IGHV4-4A0A075B6R2 117 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 IGHV1OR15-1A0A075B7D0 117 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 RPP25LQ8N5L8 163 aaKnown RBP9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
CACNA1C-204ENST00000347598 YLPM1P49750 1951 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 SVILO95425 2214 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 ATRAIDQ6UW56 229 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 Q6ZQT7 251 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 NEGR1Q7Z3B1 354 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 PTPRFP10586 1907 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 ZC2HC1BQ5TFG8 222 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 MLANAQ16655 118 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 ADAMTSL5Q6ZMM2 481 aa9.62□□□□□ -0.87
CACNA1C-204ENST00000347598 COL11A2P13942 1736 aaPredicted RBP9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 MST1P26927 711 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 CXCL1P09341 107 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 CT83Q5H943 113 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 KNL1Q8NG31 2342 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 IGKV1D-17A0A075B6S4 117 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 ESPL1Q14674 2120 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 ZNF503Q96F45 646 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 SHANK2-AS3Q9BTD1 123 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 LINC00473A8K010 186 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 NBL1P41271 181 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 C5orf24Q7Z6I8 188 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 Q86TA4 180 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 ZNRD1Q9P1U0 126 aa9.61□□□□□ -0.87
CACNA1C-204ENST00000347598 TRAV26-2A0A0B4J265 109 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 TMEM75Q8N9X5 138 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 G3V318 75 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 CRYGCP07315 174 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 XCL1P47992 114 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 XIRP1Q702N8 1843 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 IGHV1-24A0A0C4DH33 117 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 TMEM213A2RRL7 107 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms