RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 YLPM1P49750 1951 aaKnown RBP8.81□□□□□ -1
CLCN6-202ENST00000346436 PCNX1Q96RV3 2341 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 OVOL3O00110 214 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 PMCHL1Q16048 86 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 ASPHD1Q5U4P2 390 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 OR10AG1Q8NH19 301 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 DOPEY2Q9Y3R5 2298 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 TRBV6-6A0A0A6YYG2 114 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 DEFB131AP59861 70 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 AGMATQ9BSE5 352 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 CIDEAO60543 219 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 LHBP01229 141 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 STAG3L3P0CL85 134 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 FREM1Q5H8C1 2179 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 IGKV1D-17A0A075B6S4 117 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 HIGD1CA8MV81 97 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 IGHV2-5P01817 119 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 FAM120AOSQ5T036 256 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 ZNF664Q8N3J9 261 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 VCX2Q9H322 139 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 F8WEM9 126 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 ARHGAP21Q5T5U3 1957 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 GZMBP10144 247 aa8.8□□□□□ -1
CLCN6-202ENST00000346436 TRBV9A0A0B4J1U6 114 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 LYPD2Q6UXB3 125 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 SEC11AP67812 179 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 FBLN7Q53RD9 439 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 SIGLEC9Q9Y336 463 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 BRCA2P51587 3418 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 LBHQ53QV2 105 aaPredicted RBP8.79□□□□□ -1
CLCN6-202ENST00000346436 DUX4L9Q6RFH8 374 aaPredicted RBP8.79□□□□□ -1
CLCN6-202ENST00000346436 ZNF562Q6V9R5 426 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 LURAP1LQ8IV03 231 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 FAM215AQ9Y5M1 114 aa8.79□□□□□ -1
CLCN6-202ENST00000346436 H3BUA1 57 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 HBBP68871 147 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 IGFL2Q6UWQ7 119 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 RPRMLQ8N4K4 120 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 SS18Q15532 418 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 LINC00479Q96M42 142 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 SCGB3A1Q96QR1 104 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 DKK1O94907 266 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 OR5A1Q8NGJ0 315 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 A0A1B0GUT8 65 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 FCN3O75636 299 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 IGKV1-16P04430 117 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 EVI2AP22794 236 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 IGHV2-70P01814 119 aa8.78□□□□□ -1
CLCN6-202ENST00000346436 MRPL27Q9P0M9 148 aaKnown RBP8.78□□□□□ -1
CLCN6-202ENST00000346436 H0YJW9 148 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 Q6ZR03 302 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 ZNF114Q8NC26 417 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 LYPD6BQ8NI32 183 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 CLPSL1A2RUU4 121 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 IZUMO1RA6ND01 250 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 F11RQ9Y624 299 aaKnown RBP8.77□□□□□ -1.01
CLCN6-202ENST00000346436 RHODO00212 210 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 DEFB112Q30KQ8 113 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 SHISA2Q6UWI4 295 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 F2Z2F3 143 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 PFN1P07737 140 aaKnown RBP8.77□□□□□ -1.01
CLCN6-202ENST00000346436 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 OR11H2Q8NH07 326 aa8.77□□□□□ -1.01
CLCN6-202ENST00000346436 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
CLCN6-202ENST00000346436 SCGB1A1P11684 91 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 CCL18P55774 89 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 RPL24P83731 157 aaKnown RBP8.76□□□□□ -1.01
CLCN6-202ENST00000346436 CCL24O00175 119 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 PHLDA1Q8WV24 401 aaPredicted RBP8.76□□□□□ -1.01
CLCN6-202ENST00000346436 C5orf42Q9H799 3197 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 TCTEX1D4Q5JR98 221 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 S100A7L2Q5SY68 101 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 C10orf105Q8TEF2 133 aa8.76□□□□□ -1.01
CLCN6-202ENST00000346436 CD28P10747 220 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 SLC25A34Q6PIV7 304 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.75□□□□□ -1.01
CLCN6-202ENST00000346436 H7C2G1 150 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 ATP6V0E1O15342 81 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 IGHV3-53P01767 116 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 TDGF1P3P51864 188 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 ZNF138P52744 262 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 C18orf15Q96N68 181 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
CLCN6-202ENST00000346436 ABCA1O95477 2261 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 H3BVH4 76 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 ITGB1BP1O14713 200 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 NCOR1P1Q9H4R4 102 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 SMAD5-AS1Q9Y6J3 95 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 TRGV9Q99603 122 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 KLF17Q5JT82 389 aaPredicted RBP8.75□□□□□ -1.01
CLCN6-202ENST00000346436 PSG8Q9UQ74 426 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 CYSLTR1Q9Y271 337 aa8.75□□□□□ -1.01
CLCN6-202ENST00000346436 SPTAN1Q13813 2472 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms