RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 LOXP28300 417 aaPredicted RBP12.46□□□□□ -0.42
PTPRU-201ENST00000345512 CLEC19AQ6UXS0 136 aa12.46□□□□□ -0.42
PTPRU-201ENST00000345512 OR11H1Q8NG94 326 aa12.46□□□□□ -0.42
PTPRU-201ENST00000345512 OR11H2Q8NH07 326 aa12.46□□□□□ -0.42
PTPRU-201ENST00000345512 FAM167A-AS1Q96KT0 104 aa12.46□□□□□ -0.42
PTPRU-201ENST00000345512 ESDP10768 282 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 DKK4Q9UBT3 224 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 WIPF2Q8TF74 440 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-201ENST00000345512 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 NHP2Q9NX24 153 aaKnown RBP12.45□□□□□ -0.42
PTPRU-201ENST00000345512 JKAMPQ9P055 326 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 SH2D1AO60880 128 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 THAP8Q8NA92 274 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 SHANK2-AS3Q9BTD1 123 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 MEGF9Q9H1U4 602 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 WT1P19544 449 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-201ENST00000345512 HSD52Q0P140 79 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 KLRD1Q13241 179 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 ZNF672Q499Z4 452 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-201ENST00000345512 LYRM7Q5U5X0 104 aa12.45□□□□□ -0.42
PTPRU-201ENST00000345512 CD5LO43866 347 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
PTPRU-201ENST00000345512 PPBPP02775 128 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 GAGE12BA1L429 117 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 CIDEAO60543 219 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 EEF1AKMT3Q96AZ1 226 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 ZNF503Q96F45 646 aa12.44□□□□□ -0.42
PTPRU-201ENST00000345512 LY6HO94772 140 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 PSMB2P49721 201 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 RIPPLY3P57055 190 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 LYPD1Q8N2G4 141 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 NXT2Q9NPJ8 142 aaKnown RBP12.43□□□□□ -0.42
PTPRU-201ENST00000345512 PF4V1P10720 104 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 TRBV19A0A075B6N1 114 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 NDUFA3O95167 84 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 ATP5G2Q06055 141 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 HCFC1P51610 2035 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 E7EUB6 86 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 HTN1P15515 57 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 COL8A2P25067 703 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 OR9G4Q8NGQ1 327 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 TP53TG3Q9ULZ0 132 aa12.43□□□□□ -0.42
PTPRU-201ENST00000345512 PRSS46E5RG02 174 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 E7EQL1 145 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 H3BVH4 76 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
PTPRU-201ENST00000345512 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
PTPRU-201ENST00000345512 LINC00311Q8N616 119 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 ANKHD1Q8IWZ3 2542 aaKnown RBP12.42□□□□□ -0.42
PTPRU-201ENST00000345512 A0A0G2JLM5 398 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 LINC00173Q6ZV60 143 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 RNF5Q99942 180 aa12.42□□□□□ -0.42
PTPRU-201ENST00000345512 TMEM238LA0A1B0GVL6 79 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 A6NJY4 79 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 IGLC1P0CG04 106 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 RHOGP84095 191 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 C5orf64Q2M2E5 130 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 C3orf36Q3SXR2 165 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 C8orf49Q96NF6 230 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 CCL25O15444 150 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 SCGB3A1Q96QR1 104 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 HAX1O00165 279 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 DPM2O94777 84 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 CHD9Q3L8U1 2897 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 LTAP01374 205 aa12.41□□□□□ -0.42
PTPRU-201ENST00000345512 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.4□□□□□ -0.42
PTPRU-201ENST00000345512 PSMG4Q5JS54 123 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 OR1N2Q8NGR9 330 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
PTPRU-201ENST00000345512 CEACAM8P31997 349 aaPredicted RBP12.4□□□□□ -0.42
PTPRU-201ENST00000345512 CST9LQ9H4G1 147 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 IGKCP01834 107 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 KIR3DS1Q14943 382 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 BCL6BQ8N143 479 aaPredicted RBP12.4□□□□□ -0.42
PTPRU-201ENST00000345512 C17orf77Q96MU5 243 aa12.4□□□□□ -0.42
PTPRU-201ENST00000345512 C22orf46C9J442 243 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 TMEM75Q8N9X5 138 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 TRGV3P03979 118 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 C15orf32Q32M92 178 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 BVES-AS1Q5T3Y7 98 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 CTSZQ9UBR2 303 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 UNC80Q8N2C7 3258 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 PIEZO2Q9H5I5 2752 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 LY6EQ16553 131 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 RITA1Q96K30 269 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 SLC50A1Q9BRV3 221 aa12.39□□□□□ -0.43
PTPRU-201ENST00000345512 IGLV2-8P01709 118 aa12.38□□□□□ -0.43
PTPRU-201ENST00000345512 SAMD5Q5TGI4 173 aa12.38□□□□□ -0.43
PTPRU-201ENST00000345512 FAM104BQ5XKR9 115 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms